ModCRE DB

Transcription factor

Q8TF39 - ZNF483

Zinc finger protein 483 (Zinc finger protein with KRAB and SCAN domains 16)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 744 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07638_2.00 Known CisBP TGCAGCTCCCTGCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 744 aa
436-714

Region 436-714 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 436-7141 model
Actions
Predicted = Low TFS_Q8TF39:436:714_5wjq_D_1 5wjq 436-714 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
49-136PF02023SCAN domainNo overlap with loaded model regions
169-209PF01352KRAB boxNo overlap with loaded model regions
439-461PF00096Zinc finger, C2H2 typeoverlaps 436-714
467-489PF00096Zinc finger, C2H2 typeoverlaps 436-714
495-517PF00096Zinc finger, C2H2 typeoverlaps 436-714
523-545PF00096Zinc finger, C2H2 typeoverlaps 436-714
551-573PF00096Zinc finger, C2H2 typeoverlaps 436-714
579-601PF00096Zinc finger, C2H2 typeoverlaps 436-714
635-657PF00096Zinc finger, C2H2 typeoverlaps 436-714
663-685PF00096Zinc finger, C2H2 typeoverlaps 436-714
691-713PF00096Zinc finger, C2H2 typeoverlaps 436-714
719-741PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions