ModCRE DB

Transcription factor

Q8TF45 - ZNF418

Zinc finger protein 418

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 676 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
M07712_2.00 Known CisBP ACATTTTTTTAATCTAAAAAAACATTTACA Direct PWM Open · Scan
MA1980.1 Known JASPAR AAGAGGCTAAAAGCA Direct PWM Open · Scan
M08376_2.00 Known CisBP TGCTTTTAGCCTCTT Direct PWM Open · Scan
M08948_2.00 Known CisBP TGCTTTTAGCCTCTTCC Direct PWM Open · Scan
ZN418_HUMAN.H11MO.0.C Known HOCOMOCO TGCTTTTAGCCTCTTCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 676 aa
232-390

Region 232-390 0 PWM

Residues
159 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 232-3901 model
Actions
Predicted = Low TFS_Q8TF45:232:390_5t0u_A_1 5t0u 232-390 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
5-45PF01352KRAB boxNo overlap with loaded model regions
231-252PF00096Zinc finger, C2H2 typeoverlaps 232-390
258-280PF00096Zinc finger, C2H2 typeoverlaps 232-390
286-308PF00096Zinc finger, C2H2 typeoverlaps 232-390
314-336PF00096Zinc finger, C2H2 typeoverlaps 232-390
342-364PF00096Zinc finger, C2H2 typeoverlaps 232-390
370-392PF00096Zinc finger, C2H2 typeoverlaps 232-390
398-420PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
426-448PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
454-476PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
482-504PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
510-532PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
538-560PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
591-613PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
619-641PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
647-669PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions