ModCRE DB

Transcription factor

Q8WW38 - ZFPM2

Zinc finger protein ZFPM2 (Friend of GATA protein 2) (FOG-2) (Friend of GATA 2) (hFOG-2) (Zinc finger protein 89B) (Zinc finger protein multitype 2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1151 aa

7 Generated PWM 7 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE7
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1a1g_A_1 ModCRE Homology model ACAAGCTTTT Region 298-386 · 1 3D model Open · Scan
TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1aay_A_1 ModCRE Homology model ACAACTTTGC Region 298-386 · 1 3D model Open · Scan
TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1jk1_A_1 ModCRE Homology model ACAACACCGG Region 298-386 · 1 3D model Open · Scan
TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1jk2_A_1 ModCRE Homology model CCCCCACCCG Region 298-386 · 1 3D model Open · Scan
TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1zaa_C_1 ModCRE Homology model CCGGGGGTGG Region 298-386 · 1 3D model Open · Scan
TFS_sp_Q8WW38_FOG2_HUMAN:336:400_5t0u_A_1 ModCRE Homology model CTTTACGCTCTTAAGG Region 336-400 · 1 3D model Open · Scan
TFS_sp_Q8WW38_FOG2_HUMAN:337:385_5yj3_C_1 ModCRE Homology model CAACA Region 337-385 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1151 aa
298-400

Region 298-400 7 PWM

Residues
103 aa
Domains
No overlapping PFAM annotation recorded
3D models
7 active PDBs · 5 summary rows
Templates
1A1G, 1AAY, 1JK1, 1JK2, 1ZAA, 5T0U, 5YJ3
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
7 active PDB models 5 summary rows
Region 298-4007 models · 5 summary rows
Actions
Predicted = Low TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1a1g_A_1 1a1g 298-386 View model · PDB
Predicted = Low TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1aay_A_1 1aay 298-386 View model · PDB
Predicted = Low TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1jk1_A_1 1jk1 298-386 View model · PDB
Predicted = Low TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1jk2_A_1 1jk2 298-386 View model · PDB
Predicted = Low TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1zaa_C_1 1zaa 298-386 View model · PDB
Predicted = Low TFS_sp_Q8WW38_FOG2_HUMAN:336:400_5t0u_A_1 5t0u 336-400 View model · PDB
Predicted = Low TFS_sp_Q8WW38_FOG2_HUMAN:337:385_5yj3_C_1 5yj3 337-385 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 5t0u 252:400 336 400 P:A · DNA:B,C 29.2% / 52.3% 37 View · PDB TFS_sp_Q8WW38_FOG2_HUMAN:336:400_5t0u_A_1
2 1jk2 252:400 298 386 P:A · DNA:B,C 23.6% / 40.4% 94 View · PDB TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1jk2_A_1
3 1jk1 252:400 298 386 P:A · DNA:B,C 23.6% / 40.4% 94 View · PDB TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1jk1_A_1
4 1zaa 252:400 298 386 P:C · DNA:A,B 23.6% / 40.4% 94 View · PDB TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1zaa_C_1
5 1aay 252:400 298 386 P:A · DNA:B,C 23.6% / 40.4% 94 View · PDB TFS_sp_Q8WW38_FOG2_HUMAN:298:386_1aay_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
100-193PF21182Zinc finger protein ZFPM1-like, PR domainNo overlap with loaded model regions
1116-1151PF25445ZFPM2-like CCHC zinc fingerNo overlap with loaded model regions