ModCRE DB

Transcription factor

Q8WWU2 - SP3

Specificity protein 3 internally initiated isoform 2

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 479 aa

64 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0746.1 NN 70+% JASPAR GCCACGCCCCC 99.7% identity Open · Scan
M03682_2.00 NN 70+% CisBP ACGCCACGCCCAGT 76.3% identity Open · Scan
MA1564.1 NN 70+% JASPAR GCCACGCCCCCC 75.4% identity Open · Scan
MA0747.1 NN 70+% JASPAR GCCACGCCCACT 74.5% identity Open · Scan
M00954_2.00 NN 70+% CisBP CTACCCTA 74.4% identity Open · Scan
M02903_2.00 NN 70+% CisBP ATGCCACGCCCCTTTTTG 71.1% identity Open · Scan
MA0516.1 NN 70+% JASPAR GCCCCGCCCCCTCCC 71.0% identity Open · Scan
Nearest Neighbor (70% - 40%)57
MotifPredictionSourceDNA bindingSupportLogoActions
M00951_2.00 NN 70-40% CisBP GCTGCACG 69.7% identity Open · Scan
MA0657.1 NN 70-40% JASPAR ATGCCACGCCCCTTTTTG 68.1% identity Open · Scan
M00777_2.00 NN 70-40% CisBP ACCGTTAT 67.4% identity Open · Scan
MA1107.1 NN 70-40% JASPAR GGCCACACCCACC 67.4% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 67.0% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 67.0% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 65.8% identity Open · Scan
M00632_2.00 NN 70-40% CisBP ACACGCCCCT 63.7% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 63.5% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 62.8% identity Open · Scan
MA1513.1 NN 70-40% JASPAR GCCCCGCCCCC 62.7% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 61.6% identity Open · Scan
M00647_2.00 NN 70-40% CisBP CCCCCCC 60.7% identity Open · Scan
M04555_2.00 NN 70-40% CisBP GCCACGCCCCCGCCACGCCCAC 60.4% identity Open · Scan
MA1512.1 NN 70-40% JASPAR GCCACGCCCAC 60.4% identity Open · Scan
M00617_2.00 NN 70-40% CisBP CCACGCCCA 59.0% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 59.0% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 58.6% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 57.8% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 57.8% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 57.8% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 57.4% identity Open · Scan
MA1517.1 NN 70-40% JASPAR GGCCACGCCCA 56.8% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 56.3% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 56.0% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 56.0% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 55.8% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 55.5% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 54.0% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 54.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 53.8% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 52.5% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 52.5% identity Open · Scan
MA1514.1 NN 70-40% JASPAR CACCACGCACCCCTT 52.3% identity Open · Scan
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 51.7% identity Open · Scan
M06122_2.00 NN 70-40% CisBP GATACGCCCCCTAA 51.6% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 51.2% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 51.2% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 51.2% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 51.1% identity Open · Scan
M01432_2.00 NN 70-40% CisBP GACGCCAC 51.1% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 51.1% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 51.0% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 50.9% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 50.8% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 50.5% identity Open · Scan
M00036_2.00 NN 70-40% CisBP TACCCCTT 50.0% identity Open · Scan
M00249_2.00 NN 70-40% CisBP ACTCCCCCGCA 50.0% identity Open · Scan
M01035_2.00 NN 70-40% CisBP CCCCCTTAAT 50.0% identity Open · Scan
M01445_2.00 NN 70-40% CisBP ACACGCCGT 50.0% identity Open · Scan
M01470_2.00 NN 70-40% CisBP CCCCCCGC 50.0% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 50.0% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 50.0% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 50.0% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.0% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 479 aa
317-401

Region 317-401 0 PWM

Residues
85 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1JK2
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 317-4011 model
Actions
Predicted = Low TFS_Q8WWU2:317:401_1jk2_A_1 1jk2 317-401 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
319-343PF00096Zinc finger, C2H2 typeoverlaps 317-401
349-373PF00096Zinc finger, C2H2 typeoverlaps 317-401
379-401PF00096Zinc finger, C2H2 typeoverlaps 317-401