ModCRE DB

Transcription factor

Q8WXB4 - ZNF606

Zinc finger protein 606 (Zinc finger protein 328)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 792 aa

118 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)113
MotifPredictionSourceDNA bindingSupportLogoActions
M00960_2.00 NN 70-40% CisBP TGCATCCC 68.2% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 67.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 67.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 65.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.8% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 65.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 65.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 64.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.3% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 62.1% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 60.3% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 59.8% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 59.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 59.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 59.2% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 57.8% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 57.8% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 57.7% identity Open · Scan
M05847_2.00 NN 70-40% CisBP AGACCTACTATGC 57.1% identity Open · Scan
MA1585.1 NN 70-40% JASPAR ATAGTAGGTG 57.1% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 56.9% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 56.9% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 56.7% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 56.3% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 56.3% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 56.2% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 56.1% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 56.0% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 56.0% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 55.8% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.8% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 55.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 55.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 55.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 54.9% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 54.9% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 54.7% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 54.6% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 54.5% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 54.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 54.3% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 54.2% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 54.1% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 54.1% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 54.0% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 53.8% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.8% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 53.6% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.5% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.5% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 53.4% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 53.3% identity Open · Scan
M10303_2.00 NN 70-40% CisBP TACTGGGAATACC 52.9% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 52.8% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 52.8% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 52.8% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 52.8% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 52.8% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 52.7% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 52.7% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 52.7% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 52.6% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 52.5% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 52.4% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 52.3% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 52.1% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.1% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 52.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.7% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 51.7% identity Open · Scan
M07701_2.00 NN 70-40% CisBP CCTGGGCTAGGCCCTGGC 51.6% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 51.5% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 51.4% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 51.4% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 51.4% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 51.3% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 51.3% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 51.3% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 51.2% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 51.2% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 51.2% identity Open · Scan
M08234_2.00 NN 70-40% CisBP GTCAACTTGACTGGGCCA 51.2% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 51.2% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 51.2% identity Open · Scan
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 51.2% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 51.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.2% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 51.1% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 51.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 50.9% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.8% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 50.7% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 50.6% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 50.6% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 50.6% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 50.5% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 50.4% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 50.1% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 50.1% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 50.1% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 50.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.0% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 50.0% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 50.0% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 50.0% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 50.0% identity Open · Scan
MA0746.1 NN 70-40% JASPAR GCCACGCCCCC 50.0% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 50.0% identity Open · Scan
MA1513.1 NN 70-40% JASPAR GCCCCGCCCCC 50.0% identity Open · Scan
ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_Q8WXB4_ZN606_HUMAN:621:673_1llm_D_1 ModCRE Homology model CTGCGCGCGCGA Region 621-673 · 1 3D model Open · Scan
TFS_sp_Q8WXB4_ZN606_HUMAN:396:675_5wjq_D_1 ModCRE Homology model GGGTCCCCACCCGGCCCCCCCACTCCAC Region 396-675 · 1 3D model Open · Scan
TFS_sp_Q8WXB4_ZN606_HUMAN:455:731_5v3j_E_1 ModCRE Homology model CCGGAGGGCCCCTTCCCCTCTGGGAA Region 455-731 · 1 3D model Open · Scan
TFS_sp_Q8WXB4_ZN606_HUMAN:455:731_5v3m_C_1 ModCRE Homology model GGGACACCCCCCGCCCCCCCGGCCCC Region 455-731 · 1 3D model Open · Scan
TFS_sp_Q8WXB4_ZN606_HUMAN:577:730_2i13_A_1 ModCRE Homology model ACTTAGAGAGAAGTTCTACCA Region 577-730 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 792 aa
396-731

Region 396-731 5 PWM

Residues
336 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 396-7316 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q8WXB4_ZN606_HUMAN:621:673_1llm_D_1 1llm 621-673 View model · PDB
Predicted = Low TFS_sp_Q8WXB4_ZN606_HUMAN:396:675_5wjq_D_1 5wjq 396-675 View model · PDB
Predicted = Low TFS_sp_Q8WXB4_ZN606_HUMAN:428:729_7w1m_H_1 7w1m 428-729 View model · PDB
Predicted = Low TFS_sp_Q8WXB4_ZN606_HUMAN:455:731_5v3j_E_1 5v3j 455-731 View model · PDB
Predicted = Low TFS_sp_Q8WXB4_ZN606_HUMAN:455:731_5v3m_C_1 5v3m 455-731 View model · PDB
Predicted = Low TFS_sp_Q8WXB4_ZN606_HUMAN:577:730_2i13_A_1 2i13 577-730 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 395:789 577 730 P:A · DNA:C,D 61.0% / 74.0% 100 View · PDB TFS_sp_Q8WXB4_ZN606_HUMAN:577:730_2i13_A_1
1 5wjq 395:789 396 675 P:D · DNA:A,B 52.1% / 68.9% 99 View · PDB TFS_sp_Q8WXB4_ZN606_HUMAN:396:675_5wjq_D_1
2 5v3m 395:789 455 731 P:C · DNA:A,B 51.3% / 68.6% 100 View · PDB TFS_sp_Q8WXB4_ZN606_HUMAN:455:731_5v3m_C_1
3 5v3j 395:789 455 731 P:E · DNA:A,B 51.3% / 68.6% 100 View · PDB TFS_sp_Q8WXB4_ZN606_HUMAN:455:731_5v3j_E_1
1 1llm 395:789 621,621 673,673 P:C,D · DNA:A,B 45.3% / 66.0% 60,62 View · PDB DIMER_sp_Q8WXB4_ZN606_HUMAN:621:673_1llm_D_1
5 7w1m 395:789 428 729 P:H · DNA:F,G 34.7% / 53.7% 93 View · PDB TFS_sp_Q8WXB4_ZN606_HUMAN:428:729_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
61-102PF01352KRAB boxNo overlap with loaded model regions
428-450PF00096Zinc finger, C2H2 typeoverlaps 396-731
456-478PF00096Zinc finger, C2H2 typeoverlaps 396-731
484-506PF00096Zinc finger, C2H2 typeoverlaps 396-731
512-534PF00096Zinc finger, C2H2 typeoverlaps 396-731
540-562PF00096Zinc finger, C2H2 typeoverlaps 396-731
568-590PF00096Zinc finger, C2H2 typeoverlaps 396-731
596-618PF00096Zinc finger, C2H2 typeoverlaps 396-731
624-646PF00096Zinc finger, C2H2 typeoverlaps 396-731
652-674PF00096Zinc finger, C2H2 typeoverlaps 396-731
680-702PF00096Zinc finger, C2H2 typeoverlaps 396-731
708-730PF00096Zinc finger, C2H2 typeoverlaps 396-731
736-758PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
764-786PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions