ModCRE DB

Transcription factor

Q92858 - ATOH1

Transcription factor ATOH1 (Atonal bHLH transcription factor 1) (Class A basic helix-loop-helix protein 14) (bHLHa14) (Helix-loop-helix protein hATH-1) (hATH1) (Protein atonal homolog 1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 354 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA1467.1 Known JASPAR AACAGCTGTC Direct PWM Open · Scan
M04166_2.00 Known CisBP AACAGCTGTC Direct PWM Open · Scan
M04167_2.00 Known CisBP AACATATGGC Direct PWM Open · Scan
M04168_2.00 Known CisBP AACAGCTGTC Direct PWM Open · Scan
M04169_2.00 Known CisBP AACATATGTC Direct PWM Open · Scan
M08738_2.00 Known CisBP AGCAGATGG Direct PWM Open · Scan
ATOH1_HUMAN.H11MO.0.B Known HOCOMOCO AGCAGATGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 354 aa
155-208

Region 155-208 0 PWM

Residues
54 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1NKP
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 155-2081 model
Actions
Predicted = Low DIMER_Q92858:155:208_1nkp_A_1 1nkp 155-208 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
160-211PF00010Helix-loop-helix DNA-binding domainoverlaps 155-208