ModCRE DB

Transcription factor

Q92886 - NEUROG1

Neurogenin-1 (NGN-1) (Class A basic helix-loop-helix protein 6) (bHLHa6) (Neurogenic basic-helix-loop-helix protein) (Neurogenic differentiation factor 3) (NeuroD3)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 237 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
MA0623.2 Known JASPAR GACATATGTC Direct PWM Open · Scan
M04201_2.00 Known CisBP GACATATGTC Direct PWM Open · Scan
M04202_2.00 Known CisBP GACATATGTC Direct PWM Open · Scan
M04203_2.00 Known CisBP GACATATGTC Direct PWM Open · Scan
M04204_2.00 Known CisBP AACATATGTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 237 aa
109-140

Region 109-140 0 PWM

Residues
32 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
5E8I
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 109-1401 model
Actions
Predicted = Low DIMER_Q92886:109:140_5e8i_G_1 5e8i 109-140 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
93-142PF00010Helix-loop-helix DNA-binding domainoverlaps 109-140