Transcription factor

Q92908 - GATA6

Transcription factor GATA-6 (GATA-binding factor 6)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 595 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9

Motif	Prediction	Source	DNA binding	Support	Actions
MA1104.1	Known	JASPAR	AAAAGATAAGAAA	Direct PWM	Open · Scan
MA1104.2	Known	JASPAR	TTATCTTATCTTT	Direct PWM	Open · Scan
MA1104.3	Known	JASPAR	TCTTATCT	Direct PWM	Open · Scan
M04877_2.00	Known	CisBP	CGATAACGATCT	Direct PWM	Open · Scan
M04878_2.00	Known	CisBP	AGATAACGATCT	Direct PWM	Open · Scan
M08124_2.00	Known	CisBP	AAAAGATAAGAAA	Direct PWM	Open · Scan
M09118_2.00	Known	CisBP	ACAGATAAGATAA	Direct PWM	Open · Scan
M10592_2.00	Known	CisBP	AAAGATAAGC	Direct PWM	Open · Scan
GATA6_HUMAN.H11MO.0.A	Known	HOCOMOCO	ACAGATAAGATAA	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 595 aa

387-494

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 387-4941 model

				Actions
Predicted = Low	TFS_Q92908:387:494_3vd6_C_1	3vd6	387-494	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
147-376	PF05349	GATA-type transcription activator, N-terminal	No overlap with loaded model regions
390-423	PF00320	GATA zinc finger	overlaps 387-494
444-477	PF00320	GATA zinc finger	overlaps 387-494