ModCRE DB

Transcription factor

Q92967 - ZF6

Zinc finger protein zfp6

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 431 aa

35 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07712_2.00 NN 70+% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 70.0% identity Open · Scan
Nearest Neighbor (70% - 40%)34
MotifPredictionSourceDNA bindingSupportLogoActions
M00944_2.00 NN 70-40% CisBP TCGCTATAA 64.7% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 64.6% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.2% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.0% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.0% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 60.9% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 57.1% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 56.5% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 56.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.1% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 54.1% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 53.7% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 53.5% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 53.4% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 53.1% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 52.4% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 52.2% identity Open · Scan
M07666_2.00 NN 70-40% CisBP ATCTAGCCCCTGCCTACC 52.2% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.1% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 51.9% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 51.7% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 51.5% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 51.3% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 51.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.9% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 50.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.4% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.2% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.2% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 431 aa
170-430

Region 170-430 0 PWM

Residues
261 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 170-4301 model
Actions
Predicted = Low TFS_Q92967:170:430_5v3j_E_1 5v3j 170-430 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
191-213PF00096Zinc finger, C2H2 typeoverlaps 170-430
219-241PF00096Zinc finger, C2H2 typeoverlaps 170-430
249-269PF00096Zinc finger, C2H2 typeoverlaps 170-430
275-297PF00096Zinc finger, C2H2 typeoverlaps 170-430
303-325PF00096Zinc finger, C2H2 typeoverlaps 170-430
331-353PF00096Zinc finger, C2H2 typeoverlaps 170-430
359-381PF00096Zinc finger, C2H2 typeoverlaps 170-430
387-409PF00096Zinc finger, C2H2 typeoverlaps 170-430