ModCRE DB

Transcription factor

Q96EG3 - ZNF837

Zinc finger protein 837

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 531 aa

31 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)25
MotifPredictionSourceDNA bindingSupportLogoActions
M00952_2.00 NN 70-40% CisBP GGATGCTC 61.1% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 61.1% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 61.1% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 58.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 58.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 58.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 57.6% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 57.6% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 57.6% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 57.5% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 54.1% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 54.1% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 53.1% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 53.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.7% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 51.3% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 51.3% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 51.3% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 51.3% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 51.3% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 51.0% identity Open · Scan
M01470_2.00 NN 70-40% CisBP CCCCCCGC 50.9% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 50.7% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 50.5% identity Open · Scan
M01457_2.00 NN 70-40% CisBP GCGCACGGAC 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_Q96EG3_ZN837_HUMAN:473:522_1llm_D_1 ModCRE Homology model CGCGCGGCGCGC Region 473-522 · 1 3D model Open · Scan
TFS_sp_Q96EG3_ZN837_HUMAN:266:322_1f2i_G_1 ModCRE Homology model GGGGCTCTCCC Region 266-322 · 1 3D model Open · Scan
TFS_sp_Q96EG3_ZN837_HUMAN:266:322_1f2i_H_1 ModCRE Homology model GGGAACGCTCC Region 266-322 · 1 3D model Open · Scan
TFS_sp_Q96EG3_ZN837_HUMAN:267:321_4gzn_C_1 ModCRE Homology model ATGTAGTAAA Region 267-321 · 1 3D model Open · Scan
TFS_sp_Q96EG3_ZN837_HUMAN:267:321_4m9v_C_1 ModCRE Homology model ACTGGTAGTT Region 267-321 · 1 3D model Open · Scan
TFS_sp_Q96EG3_ZN837_HUMAN:273:321_5yj3_C_1 ModCRE Homology model ACCCC Region 273-321 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 531 aa
266-525

Region 266-525 6 PWM

Residues
260 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
11 active PDBs · 6 summary rows
Templates
1F2I, 1LLM, 2I13, 4GZN, 4M9V, 5EI9, 5V3J, 5V3M, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models 6 summary rows
Region 266-52511 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q96EG3_ZN837_HUMAN:473:522_1llm_D_1 1llm 473-522 View model · PDB
Predicted = Low TFS_sp_Q96EG3_ZN837_HUMAN:266:322_1f2i_G_1 1f2i 266-322 View model · PDB
Predicted = Low TFS_sp_Q96EG3_ZN837_HUMAN:266:322_1f2i_H_1 1f2i 266-322 View model · PDB
Predicted = Low TFS_sp_Q96EG3_ZN837_HUMAN:267:321_4gzn_C_1 4gzn 267-321 View model · PDB
Predicted = Low TFS_sp_Q96EG3_ZN837_HUMAN:267:321_4m9v_C_1 4m9v 267-321 View model · PDB
Predicted = Low TFS_sp_Q96EG3_ZN837_HUMAN:268:525_5v3j_E_1 5v3j 268-525 View model · PDB
Predicted = Low TFS_sp_Q96EG3_ZN837_HUMAN:268:525_5v3m_C_1 5v3m 268-525 View model · PDB
Predicted = Low TFS_sp_Q96EG3_ZN837_HUMAN:268:525_5wjq_D_1 5wjq 268-525 View model · PDB
Predicted = Low TFS_sp_Q96EG3_ZN837_HUMAN:273:321_5yj3_C_1 5yj3 273-321 View model · PDB
Predicted = Low TFS_sp_Q96EG3_ZN837_HUMAN:372:525_2i13_A_1 2i13 372-525 View model · PDB
Predicted = Low TFS_sp_Q96EG3_ZN837_HUMAN:388:498_5ei9_E_1 5ei9 388-498 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 5ei9 268:527 388 498 P:E · DNA:A,B 55.9% / 72.1% 100 View · PDB TFS_sp_Q96EG3_ZN837_HUMAN:388:498_5ei9_E_1
4 2i13 268:527 372 525 P:A · DNA:C,D 55.2% / 70.8% 100 View · PDB TFS_sp_Q96EG3_ZN837_HUMAN:372:525_2i13_A_1
1 5wjq 268:527 268 525 P:D · DNA:A,B 48.4% / 62.4% 88 View · PDB TFS_sp_Q96EG3_ZN837_HUMAN:268:525_5wjq_D_1
1 1llm 268:527 473,473 522,522 P:C,D · DNA:A,B 48.0% / 64.0% 57,58 View · PDB DIMER_sp_Q96EG3_ZN837_HUMAN:473:522_1llm_D_1
2 5v3m 268:527 268 525 P:C · DNA:A,B 44.2% / 62.8% 90 View · PDB TFS_sp_Q96EG3_ZN837_HUMAN:268:525_5v3m_C_1
3 5v3j 268:527 268 525 P:E · DNA:A,B 44.2% / 62.8% 90 View · PDB TFS_sp_Q96EG3_ZN837_HUMAN:268:525_5v3j_E_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
271-293PF00096Zinc finger, C2H2 typeoverlaps 266-525
299-321PF00096Zinc finger, C2H2 typeoverlaps 266-525
391-413PF00096Zinc finger, C2H2 typeoverlaps 266-525
419-441PF00096Zinc finger, C2H2 typeoverlaps 266-525
449-469PF00096Zinc finger, C2H2 typeoverlaps 266-525
475-497PF00096Zinc finger, C2H2 typeoverlaps 266-525
503-525PF00096Zinc finger, C2H2 typeoverlaps 266-525