ModCRE DB

Transcription factor

Q96HQ0 - ZNF419

Zinc finger protein 419

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 510 aa

2 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known2
MotifPredictionSourceDNA bindingSupportLogoActions
M08291_2.00 Known CisBP AATCCAGCCCTAGACTCTCCC Direct PWM Open · Scan
M07572_2.00 Known CisBP AATACAGCCCTAGACTCTCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 510 aa
60-86

Region 60-86 0 PWM

Residues
27 aa
Domains
PF01352 · KRAB box
3D models
1 active PDB
Templates
4S0H
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 60-861 model
Actions
Predicted = Low DIMER_Q96HQ0:60:86_4s0h_E_1 4s0h 60-86 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
27-67PF01352KRAB boxoverlaps 60-86
203-225PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
231-253PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
261-281PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
287-309PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
315-337PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
343-365PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
371-393PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
399-421PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
427-449PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
455-477PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
483-505PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions