ModCRE DB

Transcription factor

Q96IR2 - ZNF845

Zinc finger protein 845

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 970 aa

86 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M07701_2.00 NN 70+% CisBP CCTGGGCTAGGCCCTGGC 79.5% identity Open · Scan
M07618_2.00 NN 70+% CisBP CCTTTGGTGCTC 72.6% identity Open · Scan
M07754_2.00 NN 70+% CisBP CGCCCCCTCCCT 71.4% identity Open · Scan
Nearest Neighbor (70% - 40%)83
MotifPredictionSourceDNA bindingSupportLogoActions
M00960_2.00 NN 70-40% CisBP TGCATCCC 68.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 64.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 64.7% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 64.7% identity Open · Scan
M07759_2.00 NN 70-40% CisBP GGAGCGCCCCTGCCCGGC 64.5% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 63.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 63.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 62.3% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 62.2% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 61.2% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 60.6% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.8% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 59.5% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 59.4% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 59.3% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.7% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 58.4% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 58.4% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 57.5% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 57.4% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 57.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 56.8% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.3% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 56.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.9% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 55.8% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 55.7% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 55.6% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 55.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.3% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 55.2% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 55.2% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.9% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 54.9% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 54.9% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 54.7% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 54.2% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 53.9% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 53.9% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 53.8% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 53.6% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 53.5% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 53.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.8% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.8% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.7% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 52.6% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 52.6% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 52.5% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 52.1% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 52.0% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.9% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 51.8% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 51.7% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 51.3% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 51.3% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 51.2% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 51.2% identity Open · Scan
M01042_2.00 NN 70-40% CisBP TGGGACCTGA 51.1% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 51.1% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 51.0% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 51.0% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 50.9% identity Open · Scan
MA0750.1 NN 70-40% JASPAR GGCGACCACCGA 50.9% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 50.6% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 50.6% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 50.6% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 50.5% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 50.4% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 50.4% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 50.3% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.3% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 50.0% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 970 aa
336-489

Region 336-489 0 PWM

Residues
154 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 336-4891 model
Actions
Predicted = Low TFS_Q96IR2:336:489_2i13_A_1 2i13 336-489 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-48PF01352KRAB boxNo overlap with loaded model regions
299-321PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
327-349PF00096Zinc finger, C2H2 typeoverlaps 336-489
355-377PF00096Zinc finger, C2H2 typeoverlaps 336-489
383-405PF00096Zinc finger, C2H2 typeoverlaps 336-489
411-433PF00096Zinc finger, C2H2 typeoverlaps 336-489
439-461PF00096Zinc finger, C2H2 typeoverlaps 336-489
467-489PF00096Zinc finger, C2H2 typeoverlaps 336-489
495-517PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
523-545PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
551-573PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
579-601PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
607-629PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
649-674PF13465Zinc-finger double domainNo overlap with loaded model regions
691-713PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
719-741PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
747-769PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
775-797PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
803-825PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
831-853PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
859-881PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
887-909PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
915-937PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
943-965PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions