ModCRE DB

Transcription factor

Q96JG9 - ZNF469

Zinc finger protein 469

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 3953 aa

8 Generated PWM 8 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)1
MotifPredictionSourceDNA bindingSupportLogoActions
MA0103.1 NN 70-40% JASPAR CACCTG 57.6% identity Open · Scan
ModCRE7
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q96JG9_ZN469_HUMAN:3338:3440_6ml2_A_1 ModCRE Homology model AAGGCGGGCAGCTGGAGCT Region 3338-3440 · 1 3D model Open · Scan
TFS_sp_Q96JG9_ZN469_HUMAN:3339:3440_5t0u_A_1 ModCRE Homology model CTAAGCCAGGGGGCCCGCCTA Region 3339-3440 · 1 3D model Open · Scan
TFS_sp_Q96JG9_ZN469_HUMAN:3339:3440_7w1m_H_1 ModCRE Homology model CCCCGCCGGGCTGCCCGGCCG Region 3339-3440 · 1 3D model Open · Scan
TFS_sp_Q96JG9_ZN469_HUMAN:3339:3440_8sss_A_1 ModCRE Homology model CCTGGCCGCACCCCCCCCCAA Region 3339-3440 · 1 3D model Open · Scan
TFS_sp_Q96JG9_ZN469_HUMAN:3339:3440_8sst_A_1 ModCRE Homology model CCGGGCCAATCTGCACCCTAC Region 3339-3440 · 1 3D model Open · Scan
TFS_sp_Q96JG9_ZN469_HUMAN:3416:3442_5yj3_C_1 ModCRE Homology model AACGG Region 3416-3442 · 1 3D model Open · Scan
TFS_sp_Q96JG9_ZN469_HUMAN:3416:3442_5yj3_D_1 ModCRE Homology model GCGGAAGGTGGT Region 3416-3442 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 3953 aa
3115-3167
3338-3442

Region 3115-3167 0 PWM

Residues
53 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB · 1 summary row
Templates
1LLM
Sources
Predicted = Low
Scan this region Show models

Region 3338-3442 7 PWM

Residues
105 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
7 active PDBs · 5 summary rows
Templates
5T0U, 5YJ3, 6ML2, 7W1M, 8SSS, 8SST
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
8 active PDB models 6 summary rows
Region 3115-31671 model · 1 summary row
Actions
Predicted = Low DIMER_sp_Q96JG9_ZN469_HUMAN:3115:3167_1llm_D_1 1llm 3115-3167 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 3328:3440 3115,3115 3167,3167 P:C,D · DNA:A,B 26.4% / 45.3% 59,61 View · PDB DIMER_sp_Q96JG9_ZN469_HUMAN:3115:3167_1llm_D_1
Region 3338-34427 models · 5 summary rows
Actions
Predicted = Low TFS_sp_Q96JG9_ZN469_HUMAN:3338:3440_6ml2_A_1 6ml2 3338-3440 View model · PDB
Predicted = Low TFS_sp_Q96JG9_ZN469_HUMAN:3339:3440_5t0u_A_1 5t0u 3339-3440 View model · PDB
Predicted = Low TFS_sp_Q96JG9_ZN469_HUMAN:3339:3440_7w1m_H_1 7w1m 3339-3440 View model · PDB
Predicted = Low TFS_sp_Q96JG9_ZN469_HUMAN:3339:3440_8sss_A_1 8sss 3339-3440 View model · PDB
Predicted = Low TFS_sp_Q96JG9_ZN469_HUMAN:3339:3440_8sst_A_1 8sst 3339-3440 View model · PDB
Predicted = Low TFS_sp_Q96JG9_ZN469_HUMAN:3416:3442_5yj3_C_1 5yj3 3416-3442 View model · PDB
Predicted = Low TFS_sp_Q96JG9_ZN469_HUMAN:3416:3442_5yj3_D_1 5yj3 3416-3442 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 8sst 3328:3440 3339 3440 P:A · DNA:B,C 31.8% / 43.9% 51 View · PDB TFS_sp_Q96JG9_ZN469_HUMAN:3339:3440_8sst_A_1
2 5t0u 3328:3440 3339 3440 P:A · DNA:B,C 30.8% / 43.0% 59 View · PDB TFS_sp_Q96JG9_ZN469_HUMAN:3339:3440_5t0u_A_1
3 7w1m 3328:3440 3339 3440 P:H · DNA:F,G 30.8% / 43.0% 31 View · PDB TFS_sp_Q96JG9_ZN469_HUMAN:3339:3440_7w1m_H_1
4 8sss 3328:3440 3339 3440 P:A · DNA:B,C 30.8% / 43.0% 51 View · PDB TFS_sp_Q96JG9_ZN469_HUMAN:3339:3440_8sss_A_1
5 6ml2 3328:3440 3338 3440 P:A · DNA:E,F 20.8% / 40.6% 74 View · PDB TFS_sp_Q96JG9_ZN469_HUMAN:3338:3440_6ml2_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
3339-3359PF00096Zinc finger, C2H2 typeoverlaps 3338-3442