ModCRE DB

Transcription factor

Q96LX8 - ZNF597

Zinc finger protein 597

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 424 aa

22 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known2
MotifPredictionSourceDNA bindingSupportLogoActions
M04531_2.00 Known CisBP GGCCGCCATTTTGT Direct PWM Open · Scan
M04532_2.00 Known CisBP GGCGGCCATTTTGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)15
MotifPredictionSourceDNA bindingSupportLogoActions
M00960_2.00 NN 70-40% CisBP TGCATCCC 55.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 53.7% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 53.7% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 53.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 52.5% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 52.3% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 51.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 51.2% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 51.2% identity Open · Scan
M07625_2.00 NN 70-40% CisBP TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 50.9% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 50.4% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 50.4% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 50.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 50.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 50.0% identity Open · Scan
ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q96LX8_ZN597_HUMAN:151:419_5wjq_D_1 ModCRE Homology model CCGAATCCCCAAGGCTACGAGCCCCAG Region 151-419 · 1 3D model Open · Scan
TFS_sp_Q96LX8_ZN597_HUMAN:156:263_5ei9_E_1 ModCRE Homology model CCGGCCCTCCCCAGCCC Region 156-263 · 1 3D model Open · Scan
TFS_sp_Q96LX8_ZN597_HUMAN:156:289_2i13_A_1 ModCRE Homology model AATTATATACTACTTCTAACA Region 156-289 · 1 3D model Open · Scan
TFS_sp_Q96LX8_ZN597_HUMAN:156:419_5v3j_E_1 ModCRE Homology model CCCCCGGGGGCCCCCCGCCCCCCCAA Region 156-419 · 1 3D model Open · Scan
TFS_sp_Q96LX8_ZN597_HUMAN:156:419_5v3m_C_1 ModCRE Homology model CCCCCCCGGCCGTCCCCCGCGCACCC Region 156-419 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 424 aa
151-419

Region 151-419 5 PWM

Residues
269 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 151-4196 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q96LX8_ZN597_HUMAN:210:249_1llm_C_1 1llm 210-249 View model · PDB
Predicted = Low TFS_sp_Q96LX8_ZN597_HUMAN:151:419_5wjq_D_1 5wjq 151-419 View model · PDB
Predicted = Low TFS_sp_Q96LX8_ZN597_HUMAN:156:263_5ei9_E_1 5ei9 156-263 View model · PDB
Predicted = Low TFS_sp_Q96LX8_ZN597_HUMAN:156:289_2i13_A_1 2i13 156-289 View model · PDB
Predicted = Low TFS_sp_Q96LX8_ZN597_HUMAN:156:419_5v3j_E_1 5v3j 156-419 View model · PDB
Predicted = Low TFS_sp_Q96LX8_ZN597_HUMAN:156:419_5v3m_C_1 5v3m 156-419 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 151:422 156 289 P:A · DNA:C,D 47.8% / 62.7% 88 View · PDB TFS_sp_Q96LX8_ZN597_HUMAN:156:289_2i13_A_1
5 5ei9 151:422 156 263 P:E · DNA:A,B 46.3% / 64.8% 97 View · PDB TFS_sp_Q96LX8_ZN597_HUMAN:156:263_5ei9_E_1
1 1llm 151:422 210,210 249,249 P:C,D · DNA:A,B 45.0% / 65.0% 45,47 View · PDB DIMER_sp_Q96LX8_ZN597_HUMAN:210:249_1llm_C_1
1 5v3m 151:422 156 419 P:C · DNA:A,B 36.0% / 52.7% 95 View · PDB TFS_sp_Q96LX8_ZN597_HUMAN:156:419_5v3m_C_1
2 5v3j 151:422 156 419 P:E · DNA:A,B 36.0% / 52.7% 95 View · PDB TFS_sp_Q96LX8_ZN597_HUMAN:156:419_5v3j_E_1
3 5wjq 151:422 151 419 P:D · DNA:A,B 34.9% / 53.2% 89 View · PDB TFS_sp_Q96LX8_ZN597_HUMAN:151:419_5wjq_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
14-54PF01352KRAB boxNo overlap with loaded model regions
156-178PF00096Zinc finger, C2H2 typeoverlaps 151-419
184-206PF00096Zinc finger, C2H2 typeoverlaps 151-419
212-234PF00096Zinc finger, C2H2 typeoverlaps 151-419
397-419PF00096Zinc finger, C2H2 typeoverlaps 151-419