ModCRE DB

Transcription factor

Q96MA1 - DMRTB1

Doublesex- and mab-3-related transcription factor B1

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 342 aa

15 Generated PWM 3 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)12
MotifPredictionSourceDNA bindingSupportLogoActions
MA0610.1 NN 70-40% JASPAR AATGTATCAAT 63.1% identity Open · Scan
MA1478.1 NN 70-40% JASPAR AATTGTTACATT 62.1% identity Open · Scan
M04694_2.00 NN 70-40% CisBP AATGTAACAATT 60.6% identity Open · Scan
M04683_2.00 NN 70-40% CisBP AATGTATCAATT 57.6% identity Open · Scan
MA1603.1 NN 70-40% JASPAR GATACAAAGTATC 57.6% identity Open · Scan
M01931_2.00 NN 70-40% CisBP TAATGTATTA 55.0% identity Open · Scan
M01933_2.00 NN 70-40% CisBP AATGTATCAA 54.7% identity Open · Scan
M00659_2.00 NN 70-40% CisBP ACTGTATCAA 54.5% identity Open · Scan
M01932_2.00 NN 70-40% CisBP AATGTATCAA 52.8% identity Open · Scan
M01926_2.00 NN 70-40% CisBP AATGTATC 50.9% identity Open · Scan
M04689_2.00 NN 70-40% CisBP AATGTATCAATT 50.9% identity Open · Scan
MA1479.1 NN 70-40% JASPAR AATTGATACATT 50.9% identity Open · Scan
ModCRE3
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q96MA1_DMRTB_HUMAN:4:65_4yj0_B_1 ModCRE Homology model GAAAAAAGTTTCACTTTG Region 4-65 · 1 3D model Open · Scan
TFS_sp_Q96MA1_DMRTB_HUMAN:4:65_4yj0_C_1 ModCRE Homology model GCGAGCAACATTGTTA Region 4-65 · 1 3D model Open · Scan
TFS_sp_Q96MA1_DMRTB_HUMAN:7:65_4yj0_A_1 ModCRE Homology model CGTGTAACCAAATTCA Region 7-65 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 342 aa
4-65

Region 4-65 3 PWM

Residues
62 aa
Domains
PF00751 · DM DNA binding domain
3D models
3 active PDBs · 3 summary rows
Templates
4YJ0
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
3 active PDB models 3 summary rows
Region 4-653 models · 3 summary rows
Actions
Predicted = Low TFS_sp_Q96MA1_DMRTB_HUMAN:4:65_4yj0_B_1 4yj0 4-65 View model · PDB
Predicted = Low TFS_sp_Q96MA1_DMRTB_HUMAN:4:65_4yj0_C_1 4yj0 4-65 View model · PDB
Predicted = Low TFS_sp_Q96MA1_DMRTB_HUMAN:7:65_4yj0_A_1 4yj0 7-65 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 4yj0 4:65 7 65 P:A · DNA:D,E 57.6% / 76.3% 95 View · PDB TFS_sp_Q96MA1_DMRTB_HUMAN:7:65_4yj0_A_1
2 4yj0 4:65 4 65 P:B · DNA:D,E 56.5% / 74.2% 98 View · PDB TFS_sp_Q96MA1_DMRTB_HUMAN:4:65_4yj0_B_1
3 4yj0 4:65 4 65 P:C · DNA:D,E 55.6% / 73.0% 98 View · PDB TFS_sp_Q96MA1_DMRTB_HUMAN:4:65_4yj0_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
7-53PF00751DM DNA binding domainoverlaps 4-65