ModCRE DB

Transcription factor

Q96MU6 - ZNF778

Zinc finger protein 778

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 729 aa

2 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known2
MotifPredictionSourceDNA bindingSupportLogoActions
M08335_2.00 Known CisBP AGTCGTTGTCTG Direct PWM Open · Scan
M07624_2.00 Known CisBP GGCCGGCATCTGGTG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 729 aa
392-668

Region 392-668 0 PWM

Residues
277 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 392-6681 model
Actions
Predicted = Low TFS_Q96MU6:392:668_5v3j_E_1 5v3j 392-668 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
42-81PF01352KRAB boxNo overlap with loaded model regions
310-330PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
365-387PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
393-415PF00096Zinc finger, C2H2 typeoverlaps 392-668
421-443PF00096Zinc finger, C2H2 typeoverlaps 392-668
449-471PF00096Zinc finger, C2H2 typeoverlaps 392-668
477-499PF00096Zinc finger, C2H2 typeoverlaps 392-668
505-527PF00096Zinc finger, C2H2 typeoverlaps 392-668
533-555PF00096Zinc finger, C2H2 typeoverlaps 392-668
561-583PF00096Zinc finger, C2H2 typeoverlaps 392-668
589-611PF00096Zinc finger, C2H2 typeoverlaps 392-668
617-639PF00096Zinc finger, C2H2 typeoverlaps 392-668
645-667PF00096Zinc finger, C2H2 typeoverlaps 392-668
673-694PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
701-723PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions