ModCRE DB

Transcription factor

Q96N22 - ZNF681

Zinc finger protein 681

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 645 aa

92 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07698_2.00 Known CisBP CCCGCGTCCTTG Direct PWM Open · Scan
Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 81.1% identity Open · Scan
M08295_2.00 NN 70+% CisBP CTGCTGGAATCTCCA 70.9% identity Open · Scan
Nearest Neighbor (70% - 40%)89
MotifPredictionSourceDNA bindingSupportLogoActions
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 69.6% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 67.0% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 66.6% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 66.4% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 65.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 65.8% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 64.7% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 64.5% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 63.7% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 63.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 63.3% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 62.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 62.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 62.3% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 61.6% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 60.9% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 60.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 60.0% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 60.0% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 59.8% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 59.2% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 59.2% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 59.2% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 59.1% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 58.4% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 58.4% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 58.2% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 58.1% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 57.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 57.2% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 57.0% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 57.0% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 56.7% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.3% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 56.2% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 56.2% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 56.2% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 55.7% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 55.7% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 55.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 55.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 55.5% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 55.0% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 55.0% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 54.8% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 54.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 54.0% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 53.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 53.6% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 53.5% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.2% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 53.1% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 53.0% identity Open · Scan
M03686_2.00 NN 70-40% CisBP TGATTGCTCTTTT 52.7% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.5% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 52.5% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 52.4% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 52.3% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 52.2% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.0% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 51.9% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 51.8% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 51.8% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 51.3% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 51.3% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 51.3% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.3% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 51.3% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 51.0% identity Open · Scan
M00143_2.00 NN 70-40% CisBP CCCCCCCACG 50.6% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 50.6% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 50.6% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 50.6% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 50.6% identity Open · Scan
MA0753.1 NN 70-40% JASPAR CCCCCCCCAC 50.6% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 50.5% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 50.5% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.2% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.2% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.2% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 50.0% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 50.0% identity Open · Scan
M10391_2.00 NN 70-40% CisBP TACCCCACATTTATTTA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 645 aa
313-417

Region 313-417 0 PWM

Residues
105 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EH2
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 313-4171 model
Actions
Predicted = Low TFS_Q96N22:313:417_5eh2_F_1 5eh2 313-417 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
3-44PF01352KRAB boxNo overlap with loaded model regions
198-220PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
314-332PF00096Zinc finger, C2H2 typeoverlaps 313-417
338-360PF00096Zinc finger, C2H2 typeoverlaps 313-417
366-388PF00096Zinc finger, C2H2 typeoverlaps 313-417
394-416PF00096Zinc finger, C2H2 typeoverlaps 313-417
422-444PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
464-489PF13465Zinc-finger double domainNo overlap with loaded model regions
506-528PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
534-556PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
576-601PF13465Zinc-finger double domainNo overlap with loaded model regions