ModCRE DB

Transcription factor

Q96N95 - ZNF396

Zinc finger protein 396 (Zinc finger and SCAN domain-containing protein 14)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 335 aa

136 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M04612_2.00 Known CisBP CTGTCCAAAAA Direct PWM Open · Scan
Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M04611_2.00 NN 70+% CisBP CTTTCGGACAC 99.3% identity Open · Scan
Nearest Neighbor (70% - 40%)134
MotifPredictionSourceDNA bindingSupportLogoActions
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 69.2% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 66.2% identity Open · Scan
M07674_2.00 NN 70-40% CisBP AAATCCTTGACAATCAAGGGTTCCCTCAC 65.9% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 65.3% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 64.9% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 64.9% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 64.8% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 64.1% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.1% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 64.1% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 63.6% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 63.5% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 63.3% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 63.2% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 63.0% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 62.9% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 62.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 62.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.8% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 62.8% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 62.8% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 62.8% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 62.8% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 62.3% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 62.3% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 62.3% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 62.3% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 62.3% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 62.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 61.7% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 61.6% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 61.5% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 61.5% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 61.5% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 61.5% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 61.4% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 61.0% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 61.0% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 61.0% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 61.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 61.0% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 61.0% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 61.0% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 60.9% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 60.9% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 60.2% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 60.2% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 60.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 60.2% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 60.2% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 59.7% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 59.7% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 59.7% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 59.4% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 59.4% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 58.9% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 58.9% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 58.9% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 58.9% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 58.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 58.5% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.1% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 57.9% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 57.8% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 57.6% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 57.6% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 57.6% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 57.6% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 57.6% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 57.3% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 57.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 57.1% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 57.1% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 57.1% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 57.1% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 57.1% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 56.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 56.4% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 56.1% identity Open · Scan
M00613_2.00 NN 70-40% CisBP TTTTTTTC 55.8% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 55.8% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 55.8% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 55.8% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 55.8% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 55.6% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 55.6% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 55.1% identity Open · Scan
M07631_2.00 NN 70-40% CisBP AATTTCAAAAATGCTATGGGC 55.1% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 55.1% identity Open · Scan
M07623_2.00 NN 70-40% CisBP GTCTAATAGAGCTGGGCTGCA 54.5% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 54.5% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 54.5% identity Open · Scan
M08239_2.00 NN 70-40% CisBP GGGCCGCTCTAGGCTGCCGG 54.5% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 54.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 54.4% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 54.4% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 54.3% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 53.8% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 53.8% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 53.8% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 53.6% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 53.5% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 53.2% identity Open · Scan
M00250_2.00 NN 70-40% CisBP AATGCTAACT 53.1% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 52.7% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 52.5% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 52.5% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 52.5% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 51.9% identity Open · Scan
M04524_2.00 NN 70-40% CisBP TAAATCACTGCATTTCACTCA 51.9% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 51.9% identity Open · Scan
M07680_2.00 NN 70-40% CisBP AACCCCAAC 51.9% identity Open · Scan
M08977_2.00 NN 70-40% CisBP AAATCACAGC 51.9% identity Open · Scan
MA0038.1 NN 70-40% JASPAR CAAATCACTG 51.9% identity Open · Scan
MA0038.2 NN 70-40% JASPAR CAAATCACTGCA 51.9% identity Open · Scan
MA0483.1 NN 70-40% JASPAR AAATCACAGCA 51.9% identity Open · Scan
M00769_2.00 NN 70-40% CisBP ACTCCCCC 51.7% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 51.2% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 51.2% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 50.7% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 50.6% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 50.6% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 50.6% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 50.6% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 50.6% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 50.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.0% identity Open · Scan
M07679_2.00 NN 70-40% CisBP TGCGATCTC 50.0% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 50.0% identity Open · Scan
M09515_2.00 NN 70-40% CisBP CCCGCCCACGCA 50.0% identity Open · Scan
MA0162.1 NN 70-40% JASPAR TGCGTGGGCGG 50.0% identity Open · Scan
MA0162.2 NN 70-40% JASPAR CCCCCGCCCCCGCC 50.0% identity Open · Scan
MA0472.1 NN 70-40% JASPAR CCCCCGCCCACGCAC 50.0% identity Open · Scan
MA0472.2 NN 70-40% JASPAR ACGCCCACGCA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 335 aa
240-329

Region 240-329 0 PWM

Residues
90 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EH2
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 240-3291 model
Actions
Predicted = Low TFS_Q96N95:240:329_5eh2_F_1 5eh2 240-329 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
48-135PF02023SCAN domainNo overlap with loaded model regions
252-273PF00096Zinc finger, C2H2 typeoverlaps 240-329
279-301PF00096Zinc finger, C2H2 typeoverlaps 240-329
307-329PF00096Zinc finger, C2H2 typeoverlaps 240-329