Transcription factor

Q96NG5 - ZNF558

Zinc finger protein 558

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 402 aa

2 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M07620_2.00	Known	CisBP	TTGGATCTGTGGATTCATGTCTTTCAT	Direct PWM		Open · Scan
MA2335.1	Known	JASPAR	ATTTGATGAAAGACATAAATCTACAGATC	Direct PWM		Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 402 aa

143-398

Residues: 256 aa
Domains: PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13912 · C2H2-type zinc finger PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models: 1 active PDB
Templates: 5V3J
Sources: Structure model

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 143-3981 model

				Actions
Predicted = Low	TFS_Q96NG5:143:398_5v3j_E_1	5v3j	143-398	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
42-83	PF01352	KRAB box	No overlap with loaded model regions
153-174	PF00096	Zinc finger, C2H2 type	overlaps 143-398
180-202	PF00096	Zinc finger, C2H2 type	overlaps 143-398
208-230	PF00096	Zinc finger, C2H2 type	overlaps 143-398
263-286	PF13912	C2H2-type zinc finger	overlaps 143-398
306-331	PF13465	Zinc-finger double domain	overlaps 143-398
348-370	PF00096	Zinc finger, C2H2 type	overlaps 143-398
376-398	PF00096	Zinc finger, C2H2 type	overlaps 143-398