ModCRE DB

Transcription factor

Q96PE6 - ZIM3

Zinc finger imprinted 3 (Zinc finger protein 657)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 472 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
M08312_2.00 Known CisBP ATTGGGTTTCTGTTGCTT Direct PWM Open · Scan
MA1709.1 Known JASPAR AGCAACAGAAACCTA Direct PWM Open · Scan
MA1709.2 Known JASPAR CAACAGAAACC Direct PWM Open · Scan
M07591_2.00 Known CisBP AGGTTTCTGTTG Direct PWM Open · Scan
M08895_2.00 Known CisBP TTGGGTTTCTGTTGCTTGC Direct PWM Open · Scan
ZIM3_HUMAN.H11MO.0.C Known HOCOMOCO TTGGGTTTCTGTTGCTTGC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 472 aa
192-471

Region 192-471 0 PWM

Residues
280 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 192-4711 model
Actions
Predicted = Low TFS_Q96PE6:192:471_5wjq_D_1 5wjq 192-471 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-48PF01352KRAB boxNo overlap with loaded model regions
195-217PF00096Zinc finger, C2H2 typeoverlaps 192-471
223-245PF00096Zinc finger, C2H2 typeoverlaps 192-471
279-301PF00096Zinc finger, C2H2 typeoverlaps 192-471
307-329PF00096Zinc finger, C2H2 typeoverlaps 192-471
335-357PF00096Zinc finger, C2H2 typeoverlaps 192-471
363-385PF00096Zinc finger, C2H2 typeoverlaps 192-471
391-413PF00096Zinc finger, C2H2 typeoverlaps 192-471
419-441PF00096Zinc finger, C2H2 typeoverlaps 192-471
449-470PF00096Zinc finger, C2H2 typeoverlaps 192-471