Region 76-94 5 PWM
- Residues
- 19 aa
- Domains
- PF12874 · Zinc-finger of C2H2 type
- 3D models
- 5 active PDBs · 5 summary rows
- Templates
- 7N5U, 7N5V, 7N5W, 8E3E, 8H9H
- Sources
- Predicted = Low
Transcription factor
Q96PM9 - ZNF385A
Zinc finger protein 385A (Hematopoietic zinc finger protein) (Retinal zinc finger protein)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 386 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE5
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_sp_Q96PM9_Z385A_HUMAN:76:94_7n5u_A_1 | ModCRE | Homology model | TTAACACAAA | Region 76-94 · 1 3D model | Open · Scan | |
| TFS_sp_Q96PM9_Z385A_HUMAN:76:94_7n5v_A_1 | ModCRE | Homology model | AAAAGAACAAA | Region 76-94 · 1 3D model | Open · Scan | |
| TFS_sp_Q96PM9_Z385A_HUMAN:76:94_7n5w_A_1 | ModCRE | Homology model | AGAGACTCCT | Region 76-94 · 1 3D model | Open · Scan | |
| TFS_sp_Q96PM9_Z385A_HUMAN:76:94_8e3e_A_1 | ModCRE | Homology model | CCCGAAATCACC | Region 76-94 · 1 3D model | Open · Scan | |
| TFS_sp_Q96PM9_Z385A_HUMAN:76:94_8h9h_G_1 | ModCRE | Homology model | TACTATTTTTG | Region 76-94 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
386 aa
76-94
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models
5 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 76-945 models · 5 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_sp_Q96PM9_Z385A_HUMAN:76:94_7n5u_A_1 | 7n5u | 76-94 | View model · PDB |
| Predicted = Low | TFS_sp_Q96PM9_Z385A_HUMAN:76:94_7n5v_A_1 | 7n5v | 76-94 | View model · PDB |
| Predicted = Low | TFS_sp_Q96PM9_Z385A_HUMAN:76:94_7n5w_A_1 | 7n5w | 76-94 | View model · PDB |
| Predicted = Low | TFS_sp_Q96PM9_Z385A_HUMAN:76:94_8e3e_A_1 | 8e3e | 76-94 | View model · PDB |
| Predicted = Low | TFS_sp_Q96PM9_Z385A_HUMAN:76:94_8h9h_G_1 | 8h9h | 76-94 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 7n5v | 76:94 | 76 | 94 | P:A · DNA:X,Y | 42.1% / 68.4% | 34 | View · PDB TFS_sp_Q96PM9_Z385A_HUMAN:76:94_7n5v_A_1 |
| 2 | 7n5u | 76:94 | 76 | 94 | P:A · DNA:X,Y | 42.1% / 68.4% | 23 | View · PDB TFS_sp_Q96PM9_Z385A_HUMAN:76:94_7n5u_A_1 |
| 3 | 8h9h | 76:94 | 76 | 94 | P:G · DNA:A,B | 42.1% / 68.4% | 23 | View · PDB TFS_sp_Q96PM9_Z385A_HUMAN:76:94_8h9h_G_1 |
| 4 | 7n5w | 76:94 | 76 | 94 | P:A · DNA:X,Y | 42.1% / 68.4% | 22 | View · PDB TFS_sp_Q96PM9_Z385A_HUMAN:76:94_7n5w_A_1 |
| 5 | 8e3e | 76:94 | 76 | 94 | P:A · DNA:X,Y | 42.1% / 68.4% | 17 | View · PDB TFS_sp_Q96PM9_Z385A_HUMAN:76:94_8e3e_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 75-98 | PF12874 | Zinc-finger of C2H2 type | overlaps 76-94 |
| 201-225 | PF12874 | Zinc-finger of C2H2 type | No overlap with loaded model regions |
| 261-285 | PF12874 | Zinc-finger of C2H2 type | No overlap with loaded model regions |