ModCRE DB

Transcription factor

Q96RI1 - NR1H4

Bile acid receptor (Farnesoid X-activated receptor) (Farnesol receptor HRR-1) (Nuclear receptor subfamily 1 group H member 4) (Retinoid X receptor-interacting protein 14) (RXR-interacting protein 14)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 486 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9
MotifPredictionSourceDNA bindingSupportLogoActions
MA1110.1 Known JASPAR TCAATGACCTA Direct PWM Open · Scan
MA1146.1 Known JASPAR GAGGTCATTGACCTT Direct PWM Open · Scan
MA1146.2 Known JASPAR AGGTCATTGACCT Direct PWM Open · Scan
M00367_2.00 Known CisBP TGATATTATATCA Direct PWM Open · Scan
M00368_2.00 Known CisBP AGAGGTCATC Direct PWM Open · Scan
M05876_2.00 Known CisBP GAGGTCAAATG Direct PWM Open · Scan
M08152_2.00 Known CisBP TAGGTCATTGA Direct PWM Open · Scan
M09263_2.00 Known CisBP CCTCGGGGTCATTGACCCC Direct PWM Open · Scan
NR1H4_HUMAN.H11MO.0.B Known HOCOMOCO GGGGTCAATGACCCCGAGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 486 aa
134-207

Region 134-207 0 PWM

Residues
74 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1R0O
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 134-2071 model
Actions
Predicted = Low DIMER_Q96RI1:134:207_1r0o_B_1 1r0o 134-207 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
136-202PF00105Double treble clef zinc finger, C4 typeoverlaps 134-207
298-469PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions