ModCRE DB

Transcription factor

Q96RJ6 - FERD3L

Fer3-like protein (Basic helix-loop-helix protein N-twist) (Class A basic helix-loop-helix protein 31) (bHLHa31) (Nephew of atonal 3) (Neuronal twist)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 166 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
MA1485.1 Known JASPAR GCAACAGCTGTTAC Direct PWM Open · Scan
M04140_2.00 Known CisBP GTAACAGCTGTTGC Direct PWM Open · Scan
M04141_2.00 Known CisBP GTAACATATGGTGC Direct PWM Open · Scan
M04142_2.00 Known CisBP GTAACAGCTGTTGC Direct PWM Open · Scan
M04143_2.00 Known CisBP GTAACATATGGTGC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 166 aa
101-159

Region 101-159 0 PWM

Residues
59 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
2QL2
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 101-1591 model
Actions
Predicted = Low DIMER_Q96RJ6:101:159_2ql2_B_1 2ql2 101-159 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
102-153PF00010Helix-loop-helix DNA-binding domainoverlaps 101-159