ModCRE DB

Transcription factor

Q96SE7 - ZNF347

Zinc finger protein 347 (Zinc finger protein 1111)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 839 aa

87 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 71.7% identity Open · Scan
Nearest Neighbor (70% - 40%)86
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 69.4% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 65.8% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 65.1% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 64.7% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 64.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 64.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 63.8% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.5% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 62.2% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 61.7% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 61.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 60.9% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 60.6% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 60.1% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 60.1% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 60.0% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 59.9% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 58.6% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 58.6% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 58.6% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 58.5% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 58.3% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 57.8% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 57.8% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 57.4% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 57.4% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 57.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 57.1% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 56.8% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 56.6% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 56.2% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 55.9% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 55.7% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.7% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 55.7% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 55.5% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 55.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 55.1% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 54.8% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 54.7% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 54.6% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 54.3% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 54.0% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 54.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 54.0% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 53.9% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 53.6% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 53.4% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 53.4% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 53.0% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 52.9% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.8% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 52.6% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 52.1% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 52.1% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 52.1% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 52.0% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 51.8% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 51.8% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 51.8% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 51.5% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.5% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 51.4% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 51.4% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 51.3% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 51.2% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 51.1% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 51.0% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 51.0% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 51.0% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 50.8% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 50.5% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 50.4% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 50.3% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 50.3% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 50.2% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.0% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 50.0% identity Open · Scan
M07759_2.00 NN 70-40% CisBP GGAGCGCCCCTGCCCGGC 50.0% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.0% identity Open · Scan
MA0750.1 NN 70-40% JASPAR GGCGACCACCGA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 839 aa
270-423

Region 270-423 0 PWM

Residues
154 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 270-4231 model
Actions
Predicted = Low TFS_Q96SE7:270:423_2i13_A_1 2i13 270-423 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-48PF01352KRAB boxNo overlap with loaded model regions
265-283PF00096Zinc finger, C2H2 typeoverlaps 270-423
289-311PF00096Zinc finger, C2H2 typeoverlaps 270-423
317-339PF00096Zinc finger, C2H2 typeoverlaps 270-423
345-367PF00096Zinc finger, C2H2 typeoverlaps 270-423
373-395PF00096Zinc finger, C2H2 typeoverlaps 270-423
401-423PF00096Zinc finger, C2H2 typeoverlaps 270-423
429-451PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
457-479PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
485-507PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
513-535PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
541-563PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
569-591PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
597-619PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
653-675PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
681-703PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
709-731PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
737-759PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
765-787PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions