ModCRE DB

Transcription factor

Q96SK3 - ZNF607

Zinc finger protein 607

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 696 aa

62 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)53
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 65.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 65.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 64.7% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 63.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 62.3% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 62.3% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.1% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.6% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 59.2% identity Open · Scan
MA0155.1 NN 70-40% JASPAR TGTCAGGGGGCG 59.2% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 57.8% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 57.7% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 57.2% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 56.7% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 55.7% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 55.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 55.0% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 54.9% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 54.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 54.0% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 53.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 53.6% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.5% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 53.2% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 53.2% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 53.2% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 53.1% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.1% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 52.8% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 52.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 52.2% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 52.0% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 51.7% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.4% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 51.1% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 51.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 51.0% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 51.0% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 50.9% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.8% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 50.7% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 50.5% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 50.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 50.2% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.2% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 50.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 50.0% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 50.0% identity Open · Scan
ModCRE9
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q96SK3_ZN607_HUMAN:179:331_2i13_A_1 ModCRE Homology model AACACCCTACGCCAGCTACCG Region 179-331 · 1 3D model Open · Scan
TFS_sp_Q96SK3_ZN607_HUMAN:196:306_6e94_A_1 ModCRE Homology model AGGGGACGAGGCGACCCA Region 196-306 · 1 3D model Open · Scan
TFS_sp_Q96SK3_ZN607_HUMAN:222:332_5egb_A_1 ModCRE Homology model CCGTGTGCGGGGGGGGCG Region 222-332 · 1 3D model Open · Scan
TFS_sp_Q96SK3_ZN607_HUMAN:222:332_5ei9_E_1 ModCRE Homology model CCCCCAGGTGGGCCCCC Region 222-332 · 1 3D model Open · Scan
TFS_sp_Q96SK3_ZN607_HUMAN:224:332_5eh2_F_1 ModCRE Homology model CCCCCAGGGGGGAGGCCGG Region 224-332 · 1 3D model Open · Scan
TFS_sp_Q96SK3_ZN607_HUMAN:362:639_5wjq_D_1 ModCRE Homology model GGAGCGGGCGGAAGGGGGGACTGGAGGG Region 362-639 · 1 3D model Open · Scan
TFS_sp_Q96SK3_ZN607_HUMAN:374:527_2i13_A_1 ModCRE Homology model ATCTAGAAGTAGCAGGTGGTT Region 374-527 · 1 3D model Open · Scan
TFS_sp_Q96SK3_ZN607_HUMAN:392:668_5v3j_E_1 ModCRE Homology model TTCCACGGGGACCCCGCGCCCTGGGG Region 392-668 · 1 3D model Open · Scan
TFS_sp_Q96SK3_ZN607_HUMAN:392:668_5v3m_C_1 ModCRE Homology model CGGGGGGGGGGGACGGGGGTGTCAGC Region 392-668 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 696 aa
179-332
362-668

Region 179-332 5 PWM

Residues
154 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
5 active PDBs
Templates
2I13, 5EGB, 5EH2, 5EI9, 6E94
Sources
Predicted = Low
Scan this region Show models

Region 362-668 4 PWM

Residues
307 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models 6 summary rows
Region 179-3325 models
Actions
Predicted = Low TFS_sp_Q96SK3_ZN607_HUMAN:179:331_2i13_A_1 2i13 179-331 View model · PDB
Predicted = Low TFS_sp_Q96SK3_ZN607_HUMAN:196:306_6e94_A_1 6e94 196-306 View model · PDB
Predicted = Low TFS_sp_Q96SK3_ZN607_HUMAN:222:332_5egb_A_1 5egb 222-332 View model · PDB
Predicted = Low TFS_sp_Q96SK3_ZN607_HUMAN:222:332_5ei9_E_1 5ei9 222-332 View model · PDB
Predicted = Low TFS_sp_Q96SK3_ZN607_HUMAN:224:332_5eh2_F_1 5eh2 224-332 View model · PDB
Region 362-6686 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q96SK3_ZN607_HUMAN:475:526_1llm_D_1 1llm 475-526 View model · PDB
Predicted = Low TFS_sp_Q96SK3_ZN607_HUMAN:362:639_5wjq_D_1 5wjq 362-639 View model · PDB
Predicted = Low TFS_sp_Q96SK3_ZN607_HUMAN:365:663_7w1m_H_1 7w1m 365-663 View model · PDB
Predicted = Low TFS_sp_Q96SK3_ZN607_HUMAN:374:527_2i13_A_1 2i13 374-527 View model · PDB
Predicted = Low TFS_sp_Q96SK3_ZN607_HUMAN:392:668_5v3j_E_1 5v3j 392-668 View model · PDB
Predicted = Low TFS_sp_Q96SK3_ZN607_HUMAN:392:668_5v3m_C_1 5v3m 392-668 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 362:668 374 527 P:A · DNA:C,D 57.1% / 64.3% 100 View · PDB TFS_sp_Q96SK3_ZN607_HUMAN:374:527_2i13_A_1
1 5wjq 362:668 362 639 P:D · DNA:A,B 52.5% / 70.1% 98 View · PDB TFS_sp_Q96SK3_ZN607_HUMAN:362:639_5wjq_D_1
2 5v3m 362:668 392 668 P:C · DNA:A,B 50.9% / 68.6% 100 View · PDB TFS_sp_Q96SK3_ZN607_HUMAN:392:668_5v3m_C_1
3 5v3j 362:668 392 668 P:E · DNA:A,B 50.9% / 68.6% 100 View · PDB TFS_sp_Q96SK3_ZN607_HUMAN:392:668_5v3j_E_1
1 1llm 362:668 475,475 526,526 P:C,D · DNA:A,B 46.2% / 61.5% 59,61 View · PDB DIMER_sp_Q96SK3_ZN607_HUMAN:475:526_1llm_D_1
5 7w1m 362:668 365 663 P:H · DNA:F,G 35.1% / 50.0% 92 View · PDB TFS_sp_Q96SK3_ZN607_HUMAN:365:663_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
5-45PF01352KRAB boxNo overlap with loaded model regions
114-136PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
170-192PF00096Zinc finger, C2H2 typeoverlaps 179-332
197-219PF00096Zinc finger, C2H2 typeoverlaps 179-332
225-247PF00096Zinc finger, C2H2 typeoverlaps 179-332
253-275PF00096Zinc finger, C2H2 typeoverlaps 179-332
281-303PF00096Zinc finger, C2H2 typeoverlaps 179-332
309-330PF00096Zinc finger, C2H2 typeoverlaps 179-332
365-387PF00096Zinc finger, C2H2 typeoverlaps 362-668
393-415PF00096Zinc finger, C2H2 typeoverlaps 362-668
421-443PF00096Zinc finger, C2H2 typeoverlaps 362-668
449-471PF00096Zinc finger, C2H2 typeoverlaps 362-668
477-499PF00096Zinc finger, C2H2 typeoverlaps 362-668
505-527PF00096Zinc finger, C2H2 typeoverlaps 362-668
533-555PF00096Zinc finger, C2H2 typeoverlaps 362-668
561-583PF00096Zinc finger, C2H2 typeoverlaps 362-668
589-611PF00096Zinc finger, C2H2 typeoverlaps 362-668
645-667PF00096Zinc finger, C2H2 typeoverlaps 362-668
673-695PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions