Transcription factor

Q96TA9

SWI related protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1208 aa

2 Generated PWM 2 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_tr_Q96TA9_Q96TA9_HUMAN:623:744_1kqq_A_1	ModCRE	Homology model	TTATTTTGTCAA	Region 623-744 · 1 3D model		Open · Scan
TFS_tr_Q96TA9_Q96TA9_HUMAN:647:731_2oeh_A_1	ModCRE	Homology model	ATCATCGCTTAAA	Region 647-731 · 1 3D model		Open · Scan

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1208 aa

623-744

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

2 active PDB models 2 summary rows

Region 623-7442 models · 2 summary rows

				Actions
Predicted = Low	TFS_tr_Q96TA9_Q96TA9_HUMAN:623:744_1kqq_A_1	1kqq	623-744	View model · PDB
Predicted = Low	TFS_tr_Q96TA9_Q96TA9_HUMAN:647:731_2oeh_A_1	2oeh	647-731	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
1	1kqq	623:744	623	744	P:A · DNA:B,C	32.5% / 60.2%	92	View · PDB TFS_tr_Q96TA9_Q96TA9_HUMAN:623:744_1kqq_A_1
2	2oeh	623:744	647	731	P:A · DNA:B,C	22.1% / 54.7%	79	View · PDB TFS_tr_Q96TA9_Q96TA9_HUMAN:647:731_2oeh_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
637-721	PF01388	ARID/BRIGHT DNA binding domain	overlaps 623-744