ModCRE DB

Transcription factor

Q99081 - TCF12

Transcription factor 12 (TCF-12) (Class B basic helix-loop-helix protein 20) (bHLHb20) (DNA-binding protein HTF4) (E-box-binding protein) (Transcription factor HTF-4)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 682 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9
MotifPredictionSourceDNA bindingSupportLogoActions
MA1648.1 Known JASPAR CGCACCTGCCG Direct PWM Open · Scan
MA1648.2 Known JASPAR CACCTGC Direct PWM Open · Scan
M04137_2.00 Known CisBP GCACCTGC Direct PWM Open · Scan
M04138_2.00 Known CisBP ACACCTGC Direct PWM Open · Scan
M07805_2.00 Known CisBP GCAGCAGCTGT Direct PWM Open · Scan
M07806_2.00 Known CisBP ACACCTGG Direct PWM Open · Scan
M08731_2.00 Known CisBP CACAGCTGCA Direct PWM Open · Scan
M09458_2.00 Known CisBP CAGCAGCTGT Direct PWM Open · Scan
HTF4_HUMAN.H11MO.0.A Known HOCOMOCO TGCAGCTGTG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 682 aa
569-640

Region 569-640 0 PWM

Residues
72 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
2YPB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 569-6401 model
Actions
Predicted = Low DIMER_Q99081:569:640_2ypb_B_1 2ypb 569-640 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
578-631PF00010Helix-loop-helix DNA-binding domainoverlaps 569-640