ModCRE DB

Transcription factor

Q99419

Interferon regulatory factor 4 (Lymphocyte-specific interferon regulatory factor) (NF-EM5)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 440 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
M03334_2.00 NN 70+% CisBP CCGAAACCGAAACTA 99.7% identity Open · Scan
MA1419.1 NN 70+% JASPAR CCGAAACCGAAACTA 99.7% identity Open · Scan
M09243_2.00 NN 70+% CisBP AAAAGAGGAACTGAAACT 92.8% identity Open · Scan
M05543_2.00 NN 70+% CisBP TCGAAACCGAAACTA 78.5% identity Open · Scan
Nearest Neighbor (70% - 40%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M02258_2.00 NN 70-40% CisBP AACGAAACT 60.9% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 440 aa
54-159

Region 54-159 0 PWM

Residues
106 aa
Domains
PF00605 · Interferon regulatory factor transcription factor
3D models
1 active PDB
Templates
1T2K
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 54-1591 model
Actions
Predicted = Low DIMER_Q99419:54:159_1t2k_A_1 1t2k 54-159 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
54-159PF00605Interferon regulatory factor transcription factoroverlaps 54-159
279-436PF10401Interferon-regulatory factor 3No overlap with loaded model regions