ModCRE DB

Transcription factor

Q99592 - ZBTB18

Zinc finger and BTB domain-containing protein 18 (58 kDa repressor protein) (Transcriptional repressor RP58) (Translin-associated zinc finger protein 1) (TAZ-1) (Zinc finger protein 238) (Zinc finger protein C2H2-171)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 522 aa

11 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known11
MotifPredictionSourceDNA bindingSupportLogoActions
MA0698.1 Known JASPAR CATCCAGATGTTC Direct PWM Open · Scan
MA0698.2 Known JASPAR ATCCAGATGTT Direct PWM Open · Scan
M02916_2.00 Known CisBP CAACATCTGGATT Direct PWM Open · Scan
M02917_2.00 Known CisBP GAACATCTGGATG Direct PWM Open · Scan
M04585_2.00 Known CisBP GAACATCTGGAAT Direct PWM Open · Scan
M04586_2.00 Known CisBP GCACATCTGGAAT Direct PWM Open · Scan
M08257_2.00 Known CisBP GCGCAGCTGCGT Direct PWM Open · Scan
M08350_2.00 Known CisBP CACATCTGG Direct PWM Open · Scan
M08928_2.00 Known CisBP CCACATCTGGA Direct PWM Open · Scan
M10282_2.00 Known CisBP GAAACATCTGGA Direct PWM Open · Scan
ZBT18_HUMAN.H11MO.0.C Known HOCOMOCO TCCAGATGTGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 522 aa
409-485

Region 409-485 0 PWM

Residues
77 aa
Domains
PF13894 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1UBD
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 409-4851 model
Actions
Predicted = Low TFS_Q99592:409:485_1ubd_C_1 1ubd 409-485 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
14-120PF00651BTB/POZ domainNo overlap with loaded model regions
370-392PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
411-432PF13894C2H2-type zinc fingeroverlaps 409-485
438-460PF00096Zinc finger, C2H2 typeoverlaps 409-485
466-489PF00096Zinc finger, C2H2 typeoverlaps 409-485