ModCRE DB

Transcription factor

Q99612 - KLF6

Krueppel-like factor 6 (B-cell-derived protein 1) (Core promoter element-binding protein) (GC-rich sites-binding factor GBF) (Proto-oncogene BCD1) (Suppressor of tumorigenicity 12 protein) (Transcription factor Zf9)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 283 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA1517.1 Known JASPAR GGCCACGCCCA Direct PWM Open · Scan
MA1517.2 Known JASPAR CCACGCCCA Direct PWM Open · Scan
M04400_2.00 Known CisBP GGCCACGCCCA Direct PWM Open · Scan
M04401_2.00 Known CisBP TGCCACGCCCA Direct PWM Open · Scan
M08857_2.00 Known CisBP CCCCCGGCCCCGCCCTTCC Direct PWM Open · Scan
KLF6_HUMAN.H11MO.0.A Known HOCOMOCO GGAAGGGCGGGGCCGGGGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 283 aa
196-282

Region 196-282 0 PWM

Residues
87 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5KE9
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 196-2821 model
Actions
Predicted = Low TFS_Q99612:196:282_5ke9_A_1 5ke9 196-282 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
200-224PF00096Zinc finger, C2H2 typeoverlaps 196-282
230-254PF00096Zinc finger, C2H2 typeoverlaps 196-282
260-282PF00096Zinc finger, C2H2 typeoverlaps 196-282