Transcription factor

Q99626 - CDX2

Homeobox protein CDX-2 (CDX-3) (Caudal-type homeobox protein 2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 313 aa

10 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known10

Motif	Prediction	Source	DNA binding	Support	Actions
MA0465.1	Known	JASPAR	AAGCCATAAAA	Direct PWM	Open · Scan
MA0465.2	Known	JASPAR	AAGCAATAAAAA	Direct PWM	Open · Scan
MA0465.3	Known	JASPAR	GCAATAAA	Direct PWM	Open · Scan
M03196_2.00	Known	CisBP	TTTTATTGC	Direct PWM	Open · Scan
M05248_2.00	Known	CisBP	GTTTACGACC	Direct PWM	Open · Scan
M05249_2.00	Known	CisBP	GTTTATGGC	Direct PWM	Open · Scan
M05250_2.00	Known	CisBP	CGTCGTAAACGC	Direct PWM	Open · Scan
M08131_2.00	Known	CisBP	TTTTATGGCTT	Direct PWM	Open · Scan
M09152_2.00	Known	CisBP	TTTTATTGCTGT	Direct PWM	Open · Scan
CDX2_HUMAN.H11MO.0.A	Known	HOCOMOCO	TTTTATTGCTGT	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 313 aa

188-243

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 188-2431 model

				Actions
Predicted = Low	DIMER_Q99626:188:243_5zjs_A_1	5zjs	188-243	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
13-176	PF04731	Caudal like protein activation region	No overlap with loaded model regions
188-243	PF00046	Homeodomain	overlaps 188-243