ModCRE DB

Transcription factor

Q99811 - PRRX2

Paired mesoderm homeobox protein 2 (Paired-related homeobox protein 2) (PRX-2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 253 aa

12 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known12
MotifPredictionSourceDNA bindingSupportLogoActions
MA0075.3 Known JASPAR CTAATTAA Direct PWM Open · Scan
MA0075.4 Known JASPAR CTAATTA Direct PWM Open · Scan
M03200_2.00 Known CisBP TTAATTGG Direct PWM Open · Scan
M05258_2.00 Known CisBP TTAACGCT Direct PWM Open · Scan
M05259_2.00 Known CisBP CTAATTGG Direct PWM Open · Scan
M05260_2.00 Known CisBP CTAACGAG Direct PWM Open · Scan
M05261_2.00 Known CisBP CTAATTGG Direct PWM Open · Scan
M05262_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M05263_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M05264_2.00 Known CisBP TTAACGAG Direct PWM Open · Scan
M09156_2.00 Known CisBP TTAATTG Direct PWM Open · Scan
PRRX2_HUMAN.H11MO.0.C Known HOCOMOCO TTAATTG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 253 aa
103-166

Region 103-166 0 PWM

Residues
64 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 103-1661 model
Actions
Predicted = Low DIMER_Q99811:103:166_1fjl_A_1 1fjl 103-166 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
105-161PF00046Homeodomainoverlaps 103-166
227-243PF03826OAR motifNo overlap with loaded model regions