ModCRE DB

Transcription factor

Q99941 - ATF6B

Cyclic AMP-dependent transcription factor ATF-6 beta (cAMP-dependent transcription factor ATF-6 beta) (Activating transcription factor 6 beta) (ATF6-beta) (Protein G13) (cAMP response element-binding protein-related protein) (Creb-rp) (cAMP-responsive element-binding protein-like 1) [Cleaved into: Processed cyclic AMP-dependent transcription factor ATF-6 beta]

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 703 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
M04041_2.00 Known CisBP GATGACGTGGCA Direct PWM Open · Scan
M04042_2.00 Known CisBP TGCCACGTGGCA Direct PWM Open · Scan
M04043_2.00 Known CisBP GTGACGTCATC Direct PWM Open · Scan
M04044_2.00 Known CisBP ACCACGATGT Direct PWM Open · Scan
M04375_2.00 Known CisBP GATGACGTCATC Direct PWM Open · Scan
M04376_2.00 Known CisBP GGTGACGTGGCA Direct PWM Open · Scan
M04377_2.00 Known CisBP TGCCACGTGGCA Direct PWM Open · Scan
M04378_2.00 Known CisBP GATGACGTCACC Direct PWM Open · Scan
Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M04379_2.00 NN 70+% CisBP GGTGACGTGGCA 99.4% identity Open · Scan
Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 703 aa
326-380

Region 326-380 0 PWM

Residues
55 aa
Domains
PF00170 · bZIP transcription factor
3D models
1 active PDB
Templates
4AUW
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 326-3801 model
Actions
Predicted = Low DIMER_Q99941:326:380_4auw_B_1 4auw 326-380 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
324-385PF00170bZIP transcription factoroverlaps 326-380