Region 140-191 0 PWM
- Residues
- 52 aa
- Domains
- PF00046 · Homeodomain
- 3D models
- 1 active PDB
- Templates
- 1JGG
- Sources
- Structure model
Transcription factor
Q9BQY4 - RHOXF2
Rhox homeobox family member 2 (Paired-like homeobox protein PEPP-2) (Testis homeobox gene 1)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 288 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M05133_2.00 | Known | CisBP | CTAATCCC | Direct PWM | Open · Scan | |
| M05132_2.00 | Known | CisBP | CTAATCCC | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
288 aa
140-191
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 140-1911 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_Q9BQY4:140:191_1jgg_B_1 | 1jgg | 140-191 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 140-191 | PF00046 | Homeodomain | overlaps 140-191 |