Region 83-140 0 PWM
- Residues
- 58 aa
- Domains
- PF00010 · Helix-loop-helix DNA-binding domain
- 3D models
- 1 active PDB
- Templates
- 1MDY
- Sources
- Structure model
Transcription factor
Q9BRJ9 - MESP1
Mesoderm posterior protein 1 (Class C basic helix-loop-helix protein 5) (bHLHc5)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 268 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M02794_2.00 | Known | CisBP | AACACCTGTG | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
268 aa
83-140
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 83-1401 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_Q9BRJ9:83:140_1mdy_A_1 | 1mdy | 83-140 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 83-136 | PF00010 | Helix-loop-helix DNA-binding domain | overlaps 83-140 |