ModCRE DB

Transcription factor

Q9BS34 - ZNF670

Zinc finger protein 670

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 389 aa

49 Generated PWM 7 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)47
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 64.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.3% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 61.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 61.3% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 61.3% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 61.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 60.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 60.2% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 60.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 59.0% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 57.7% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 57.1% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 56.9% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 55.7% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 55.6% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.9% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 54.9% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 54.9% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 54.5% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 54.5% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 54.5% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 54.5% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 54.5% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 54.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 54.3% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 54.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.5% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 53.4% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 53.2% identity Open · Scan
M07659_2.00 NN 70-40% CisBP GTCTTCCAAGTAGCTGGTGTT 52.9% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 52.8% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 52.8% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 52.4% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 52.3% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.1% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 51.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 50.8% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 50.6% identity Open · Scan
M07731_2.00 NN 70-40% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 50.6% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 50.1% identity Open · Scan
M00132_2.00 NN 70-40% CisBP TGCTACCGTT 50.0% identity Open · Scan
M01174_2.00 NN 70-40% CisBP GCTACCGT 50.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
MA1542.1 NN 70-40% JASPAR TGCTACTGTT 50.0% identity Open · Scan
ModCRE2
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_Q9BS34_ZN670_HUMAN:334:383_1llm_D_1 ModCRE Homology model TTTACGACGTGA Region 334-383 · 1 3D model Open · Scan
TFS_sp_Q9BS34_ZN670_HUMAN:81:99_2i13_A_1 ModCRE Homology model AGTATTGCGGATTG Region 81-99 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 389 aa
81-99
101-387

Region 81-99 1 PWM

Residues
19 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB
Templates
2I13
Sources
Predicted = Low
Scan this region Show models

Region 101-387 1 PWM

Residues
287 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
7 active PDB models 6 summary rows
Region 81-991 model
Actions
Predicted = Low TFS_sp_Q9BS34_ZN670_HUMAN:81:99_2i13_A_1 2i13 81-99 View model · PDB
Region 101-3876 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q9BS34_ZN670_HUMAN:334:383_1llm_D_1 1llm 334-383 View model · PDB
Predicted = Low TFS_sp_Q9BS34_ZN670_HUMAN:101:387_5wjq_D_1 5wjq 101-387 View model · PDB
Predicted = Low TFS_sp_Q9BS34_ZN670_HUMAN:102:387_5v3j_E_1 5v3j 102-387 View model · PDB
Predicted = Low TFS_sp_Q9BS34_ZN670_HUMAN:102:387_5v3m_C_1 5v3m 102-387 View model · PDB
Predicted = Low TFS_sp_Q9BS34_ZN670_HUMAN:206:359_2i13_A_1 2i13 206-359 View model · PDB
Predicted = Low TFS_sp_Q9BS34_ZN670_HUMAN:250:360_5ei9_E_1 5ei9 250-360 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 101:388 206 359 P:A · DNA:C,D 58.4% / 72.7% 100 View · PDB TFS_sp_Q9BS34_ZN670_HUMAN:206:359_2i13_A_1
5 5ei9 101:388 250 360 P:E · DNA:A,B 57.7% / 74.8% 100 View · PDB TFS_sp_Q9BS34_ZN670_HUMAN:250:360_5ei9_E_1
2 5v3m 101:388 102 387 P:C · DNA:A,B 45.5% / 60.1% 99 View · PDB TFS_sp_Q9BS34_ZN670_HUMAN:102:387_5v3m_C_1
3 5v3j 101:388 102 387 P:E · DNA:A,B 45.5% / 60.1% 99 View · PDB TFS_sp_Q9BS34_ZN670_HUMAN:102:387_5v3j_E_1
1 5wjq 101:388 101 387 P:D · DNA:A,B 45.3% / 63.4% 98 View · PDB TFS_sp_Q9BS34_ZN670_HUMAN:101:387_5wjq_D_1
1 1llm 101:388 334,334 383,383 P:C,D · DNA:A,B 44.0% / 68.0% 57,58 View · PDB DIMER_sp_Q9BS34_ZN670_HUMAN:334:383_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
3-44PF01352KRAB boxNo overlap with loaded model regions
141-163PF00096Zinc finger, C2H2 typeoverlaps 101-387
197-219PF00096Zinc finger, C2H2 typeoverlaps 101-387
239-264PF13465Zinc-finger double domainoverlaps 101-387
309-331PF00096Zinc finger, C2H2 typeoverlaps 101-387
339-359PF00096Zinc finger, C2H2 typeoverlaps 101-387
365-385PF00096Zinc finger, C2H2 typeoverlaps 101-387