ModCRE DB

Transcription factor

Q9BUG6 - ZSCAN5A

Zinc finger and SCAN domain-containing protein 5A (Zinc finger protein 495)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 496 aa

53 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known2
MotifPredictionSourceDNA bindingSupportLogoActions
M04459_2.00 Known CisBP CTGTCCCCCCCCAAATCC Direct PWM Open · Scan
M04460_2.00 Known CisBP CTGTCCCCCCCCAAATCC Direct PWM Open · Scan
Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M08390_2.00 NN 70+% CisBP GCTTTGTTGACTCAC 83.6% identity Open · Scan
Nearest Neighbor (70% - 40%)50
MotifPredictionSourceDNA bindingSupportLogoActions
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 55.2% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 54.4% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 54.2% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 54.2% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 53.7% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 53.7% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 53.6% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 53.6% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 52.9% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 52.9% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 52.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 52.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 52.2% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 52.2% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 52.2% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 52.2% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 52.2% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 52.1% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 51.8% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 51.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 51.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 51.8% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 51.8% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 51.8% identity Open · Scan
M04615_2.00 NN 70-40% CisBP CTCGATCGAAGGGCACAGTCATT 51.4% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 51.4% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 51.4% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 51.4% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 51.4% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 51.4% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 51.1% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 50.7% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 50.7% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 50.7% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 50.7% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 50.7% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 50.7% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 50.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 50.7% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 50.7% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 50.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 50.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 50.0% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 50.0% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 50.0% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 50.0% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 50.0% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 50.0% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 50.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 496 aa
355-465

Region 355-465 0 PWM

Residues
111 aa
Domains
PF00096 · Zinc finger, C2H2 type PF12874 · Zinc-finger of C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
6E93
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 355-4651 model
Actions
Predicted = Low TFS_Q9BUG6:355:465_6e93_A_1 6e93 355-465 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
40-123PF02023SCAN domainNo overlap with loaded model regions
384-406PF00096Zinc finger, C2H2 typeoverlaps 355-465
412-434PF12874Zinc-finger of C2H2 typeoverlaps 355-465
440-462PF00096Zinc finger, C2H2 typeoverlaps 355-465
468-490PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions