ModCRE DB

Transcription factor

Q9BUY5 - ZNF426

Zinc finger protein 426

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 554 aa

37 Generated PWM 7 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)31
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 63.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 63.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 62.3% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 62.3% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.3% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 61.1% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 60.7% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 60.7% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 60.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 59.5% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 59.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 57.2% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 57.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 57.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 56.9% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 56.8% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 53.6% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 53.2% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 52.8% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 52.5% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 52.2% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.5% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 51.4% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 51.4% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.4% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 51.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.9% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 50.8% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_Q9BUY5_ZN426_HUMAN:362:410_1llm_D_1 ModCRE Homology model TCGGCGCGCGGG Region 362-410 · 1 3D model Open · Scan
TFS_sp_Q9BUY5_ZN426_HUMAN:276:554_5wjq_D_1 ModCRE Homology model CCCTGGGGGGGGGGCGGGGGGAATCTCT Region 276-554 · 1 3D model Open · Scan
TFS_sp_Q9BUY5_ZN426_HUMAN:277:387_5ei9_E_1 ModCRE Homology model GGCCCAAGGGTAGGAAC Region 277-387 · 1 3D model Open · Scan
TFS_sp_Q9BUY5_ZN426_HUMAN:279:554_5v3j_E_1 ModCRE Homology model CCCCCCGGGGGGGAGGGGTCCCACAC Region 279-554 · 1 3D model Open · Scan
TFS_sp_Q9BUY5_ZN426_HUMAN:279:554_5v3m_C_1 ModCRE Homology model CCCCCGTGGGGTGGCCGGCAAATCCA Region 279-554 · 1 3D model Open · Scan
TFS_sp_Q9BUY5_ZN426_HUMAN:373:526_2i13_A_1 ModCRE Homology model TTTCTATAGCACTCTTAAAAG Region 373-526 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 554 aa
276-554

Region 276-554 6 PWM

Residues
279 aa
Domains
PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
7 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
7 active PDB models 6 summary rows
Region 276-5547 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q9BUY5_ZN426_HUMAN:362:410_1llm_D_1 1llm 362-410 View model · PDB
Predicted = Low TFS_sp_Q9BUY5_ZN426_HUMAN:276:554_5wjq_D_1 5wjq 276-554 View model · PDB
Predicted = Low TFS_sp_Q9BUY5_ZN426_HUMAN:277:387_5ei9_E_1 5ei9 277-387 View model · PDB
Predicted = Low TFS_sp_Q9BUY5_ZN426_HUMAN:277:550_7w1m_H_1 7w1m 277-550 View model · PDB
Predicted = Low TFS_sp_Q9BUY5_ZN426_HUMAN:279:554_5v3j_E_1 5v3j 279-554 View model · PDB
Predicted = Low TFS_sp_Q9BUY5_ZN426_HUMAN:279:554_5v3m_C_1 5v3m 279-554 View model · PDB
Predicted = Low TFS_sp_Q9BUY5_ZN426_HUMAN:373:526_2i13_A_1 2i13 373-526 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 5wjq 276:554 276 554 P:D · DNA:A,B 53.0% / 66.7% 99 View · PDB TFS_sp_Q9BUY5_ZN426_HUMAN:276:554_5wjq_D_1
1 1llm 276:554 362,362 410,410 P:C,D · DNA:A,B 51.0% / 63.3% 56,57 View · PDB DIMER_sp_Q9BUY5_ZN426_HUMAN:362:410_1llm_D_1
4 2i13 276:554 373 526 P:A · DNA:C,D 50.6% / 66.9% 100 View · PDB TFS_sp_Q9BUY5_ZN426_HUMAN:373:526_2i13_A_1
2 5v3m 276:554 279 554 P:C · DNA:A,B 48.2% / 67.0% 99 View · PDB TFS_sp_Q9BUY5_ZN426_HUMAN:279:554_5v3m_C_1
3 5v3j 276:554 279 554 P:E · DNA:A,B 48.2% / 67.0% 99 View · PDB TFS_sp_Q9BUY5_ZN426_HUMAN:279:554_5v3j_E_1
5 7w1m 276:554 277 550 P:H · DNA:F,G 35.3% / 51.6% 85 View · PDB TFS_sp_Q9BUY5_ZN426_HUMAN:277:550_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
41-82PF01352KRAB boxNo overlap with loaded model regions
224-246PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
295-319PF13465Zinc-finger double domainoverlaps 276-554
336-358PF00096Zinc finger, C2H2 typeoverlaps 276-554
364-386PF00096Zinc finger, C2H2 typeoverlaps 276-554
392-414PF00096Zinc finger, C2H2 typeoverlaps 276-554
421-442PF00096Zinc finger, C2H2 typeoverlaps 276-554
448-470PF00096Zinc finger, C2H2 typeoverlaps 276-554
476-498PF00096Zinc finger, C2H2 typeoverlaps 276-554
504-526PF00096Zinc finger, C2H2 typeoverlaps 276-554
532-554PF00096Zinc finger, C2H2 typeoverlaps 276-554