ModCRE DB

Transcription factor

Q9BWW7 - SCRT1

Transcriptional repressor scratch 1 (Scratch homolog 1 zinc finger protein) (SCRT) (Scratch 1) (hScrt)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 348 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
M08397_2.00 Known CisBP ATGCAACAGGTG Direct PWM Open · Scan
MA0743.1 Known JASPAR GAGCAACAGGTGGTT Direct PWM Open · Scan
MA0743.2 Known JASPAR AATTCAACAGGTGGTT Direct PWM Open · Scan
MA0743.3 Known JASPAR TCAACAGGTG Direct PWM Open · Scan
M02929_2.00 Known CisBP GAGCAACAGGTGGTT Direct PWM Open · Scan
M04655_2.00 Known CisBP AGCAACAGGTG Direct PWM Open · Scan
M04656_2.00 Known CisBP TGCAACAGGTG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 348 aa
191-322

Region 191-322 0 PWM

Residues
132 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 191-3221 model
Actions
Predicted = Low TFS_Q9BWW7:191:322_2i13_A_1 2i13 191-322 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
191-213PF00096Zinc finger, C2H2 typeoverlaps 191-322
222-244PF13912C2H2-type zinc fingeroverlaps 191-322
248-270PF00096Zinc finger, C2H2 typeoverlaps 191-322
278-298PF00096Zinc finger, C2H2 typeoverlaps 191-322
304-323PF00096Zinc finger, C2H2 typeoverlaps 191-322