Transcription factor

Q9BZE0 - GLIS2

Zinc finger protein GLIS2 (GLI-similar 2) (Neuronal Krueppel-like protein)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 524 aa

4 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known4

Motif	Prediction	Source	DNA binding	Support	Actions
MA0736.1	Known	JASPAR	GACCCCCCGCGAAG	Direct PWM	Open · Scan
M02887_2.00	Known	CisBP	GACCCCCCGCGAAG	Direct PWM	Open · Scan
M04449_2.00	Known	CisBP	ACCCCCCGCGACGC	Direct PWM	Open · Scan
M04450_2.00	Known	CisBP	GCTTCGTGGGGGGT	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 524 aa

170-315

Residues: 146 aa
Domains: PF23561 · C2H2 zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models: 1 active PDB
Templates: 2GLI
Sources: Structure model

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 170-3151 model

				Actions
Predicted = Low	TFS_Q9BZE0:170:315_2gli_A_1	2gli	170-315	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
204-233	PF23561	C2H2 zinc finger	overlaps 170-315
235-257	PF00096	Zinc finger, C2H2 type	overlaps 170-315
263-287	PF00096	Zinc finger, C2H2 type	overlaps 170-315
293-317	PF00096	Zinc finger, C2H2 type	overlaps 170-315