ModCRE DB

Transcription factor

Q9BZE3 - BARHL1

BarH-like 1 homeobox protein

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 327 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA0877.2 Known JASPAR CTAAACGG Direct PWM Open · Scan
MA0877.3 Known JASPAR ACCGTTTA Direct PWM Open · Scan
MA0877.4 Known JASPAR CGTTTA Direct PWM Open · Scan
M05091_2.00 Known CisBP CTAAACGG Direct PWM Open · Scan
M05092_2.00 Known CisBP CTAATTGC Direct PWM Open · Scan
M05093_2.00 Known CisBP CTAATTGC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 327 aa
177-236

Region 177-236 0 PWM

Residues
60 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 177-2361 model
Actions
Predicted = Low DIMER_Q9BZE3:177:236_1fjl_A_1 1fjl 177-236 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
179-235PF00046Homeodomainoverlaps 177-236