ModCRE DB

Transcription factor

Q9C009 - FOXQ1

Forkhead box protein Q1 (HNF-3/forkhead-like protein 1) (HFH-1) (Hepatocyte nuclear factor 3 forkhead homolog 1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 403 aa

4 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known4
MotifPredictionSourceDNA bindingSupportLogoActions
M09093_2.00 Known CisBP AAATAAACAATA Direct PWM Open · Scan
M04823_2.00 Known CisBP TTATATAAACAA Direct PWM Open · Scan
M04824_2.00 Known CisBP TTATGTAAACAA Direct PWM Open · Scan
FOXQ1_HUMAN.H11MO.0.C Known HOCOMOCO AATTGTTTATTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 403 aa
119-191

Region 119-191 0 PWM

Residues
73 aa
Domains
PF00250 · Forkhead domain
3D models
1 active PDB
Templates
2A07
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 119-1911 model
Actions
Predicted = Low DIMER_Q9C009:119:191_2a07_F_1 2a07 119-191 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
119-204PF00250Forkhead domainoverlaps 119-191