ModCRE DB

Transcription factor

Q9C056 - NKX6-2

Homeobox protein Nkx-6.2 (Homeobox protein NK-6 homolog B)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 277 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA0675.1 Known JASPAR CTAATTAA Direct PWM Open · Scan
MA0675.2 Known JASPAR TAATTA Direct PWM Open · Scan
M05184_2.00 Known CisBP TTAATTAC Direct PWM Open · Scan
M05185_2.00 Known CisBP TTAATTAC Direct PWM Open · Scan
M05186_2.00 Known CisBP TTAATGAC Direct PWM Open · Scan
M05187_2.00 Known CisBP TTAATGAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 277 aa
147-207

Region 147-207 0 PWM

Residues
61 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 147-2071 model
Actions
Predicted = Low DIMER_Q9C056:147:207_1fjl_A_1 1fjl 147-207 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
149-205PF00046Homeodomainoverlaps 147-207