Region 135-214 4 PWM
- Residues
- 80 aa
- Domains
- No overlapping PFAM annotation recorded
- 3D models
- 9 active PDBs · 5 summary rows
- Templates
- 3UK3, 4IS1, 7N5T, 8E3D, 8E3E, 8SSQ, 8SSR
- Sources
- Predicted = Low
Transcription factor
Q9C0D4 - ZNF518B
Zinc finger protein 518B
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1074 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE4
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_sp_Q9C0D4_Z518B_HUMAN:164:213_3uk3_C_1 | ModCRE | Homology model | ATAACTAATAT | Region 164-213 · 1 3D model | Open · Scan | |
| TFS_sp_Q9C0D4_Z518B_HUMAN:164:213_4is1_C_1 | ModCRE | Homology model | TTAACTAATAT | Region 164-213 · 1 3D model | Open · Scan | |
| TFS_sp_Q9C0D4_Z518B_HUMAN:164:214_3uk3_D_1 | ModCRE | Homology model | ATGTTCTTTC | Region 164-214 · 1 3D model | Open · Scan | |
| TFS_sp_Q9C0D4_Z518B_HUMAN:164:214_4is1_D_1 | ModCRE | Homology model | AGATTAGTTC | Region 164-214 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
1074 aa
135-214
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
9 active PDB models
5 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 135-2149 models · 5 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_sp_Q9C0D4_Z518B_HUMAN:135:211_7n5t_A_1 | 7n5t | 135-211 | View model · PDB |
| Predicted = Low | TFS_sp_Q9C0D4_Z518B_HUMAN:135:211_8e3d_A_1 | 8e3d | 135-211 | View model · PDB |
| Predicted = Low | TFS_sp_Q9C0D4_Z518B_HUMAN:135:211_8e3e_A_1 | 8e3e | 135-211 | View model · PDB |
| Predicted = Low | TFS_sp_Q9C0D4_Z518B_HUMAN:137:213_8ssq_A_1 | 8ssq | 137-213 | View model · PDB |
| Predicted = Low | TFS_sp_Q9C0D4_Z518B_HUMAN:137:213_8ssr_A_1 | 8ssr | 137-213 | View model · PDB |
| Predicted = Low | TFS_sp_Q9C0D4_Z518B_HUMAN:164:213_3uk3_C_1 | 3uk3 | 164-213 | View model · PDB |
| Predicted = Low | TFS_sp_Q9C0D4_Z518B_HUMAN:164:213_4is1_C_1 | 4is1 | 164-213 | View model · PDB |
| Predicted = Low | TFS_sp_Q9C0D4_Z518B_HUMAN:164:214_3uk3_D_1 | 3uk3 | 164-214 | View model · PDB |
| Predicted = Low | TFS_sp_Q9C0D4_Z518B_HUMAN:164:214_4is1_D_1 | 4is1 | 164-214 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 8ssr | 131:219 | 137 | 213 | P:A · DNA:B,C | 33.8% / 54.5% | 28 | View · PDB TFS_sp_Q9C0D4_Z518B_HUMAN:137:213_8ssr_A_1 |
| 2 | 8ssq | 131:219 | 137 | 213 | P:A · DNA:B,C | 33.8% / 54.5% | 28 | View · PDB TFS_sp_Q9C0D4_Z518B_HUMAN:137:213_8ssq_A_1 |
| 3 | 8e3e | 131:219 | 135 | 211 | P:A · DNA:X,Y | 28.2% / 50.0% | 69 | View · PDB TFS_sp_Q9C0D4_Z518B_HUMAN:135:211_8e3e_A_1 |
| 4 | 8e3d | 131:219 | 135 | 211 | P:A · DNA:X,Y | 28.2% / 50.0% | 69 | View · PDB TFS_sp_Q9C0D4_Z518B_HUMAN:135:211_8e3d_A_1 |
| 5 | 7n5t | 131:219 | 135 | 211 | P:A · DNA:X,Y | 28.2% / 50.0% | 69 | View · PDB TFS_sp_Q9C0D4_Z518B_HUMAN:135:211_7n5t_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.