ModCRE DB

Transcription factor

Q9C0F3 - ZNF436

Zinc finger protein 436

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 470 aa

3 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known3
MotifPredictionSourceDNA bindingSupportLogoActions
M08887_2.00 Known CisBP CCTCCTCCAGGAAGCCTTCCCTGA Direct PWM Open · Scan
M08305_2.00 Known CisBP TCCTCCAGGAAGCCC Direct PWM Open · Scan
ZN436_HUMAN.H11MO.0.C Known HOCOMOCO TCAGGGAAGGCTTCCTGGAGGAGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 470 aa
138-298

Region 138-298 0 PWM

Residues
161 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 138-2981 model
Actions
Predicted = Low TFS_Q9C0F3:138:298_5t0u_A_1 5t0u 138-298 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
13-54PF01352KRAB boxNo overlap with loaded model regions
138-160PF00096Zinc finger, C2H2 typeoverlaps 138-298
166-188PF00096Zinc finger, C2H2 typeoverlaps 138-298
194-216PF00096Zinc finger, C2H2 typeoverlaps 138-298
222-244PF00096Zinc finger, C2H2 typeoverlaps 138-298
250-272PF00096Zinc finger, C2H2 typeoverlaps 138-298
278-300PF00096Zinc finger, C2H2 typeoverlaps 138-298
306-328PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
334-356PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
362-384PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
390-412PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
418-440PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
446-468PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions