Region 49-122 0 PWM
- Residues
- 74 aa
- Domains
- PF00010 · Helix-loop-helix DNA-binding domain
- 3D models
- 1 active PDB
- Templates
- 1AM9
- Sources
- Structure model
Transcription factor
Q9C0J9 - BHLHE41
Class E basic helix-loop-helix protein 41 (bHLHe41) (Class B basic helix-loop-helix protein 3) (bHLHb3) (Differentially expressed in chondrocytes protein 2) (hDEC2) (Enhancer-of-split and hairy-related protein 1) (SHARP-1)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 482 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known5
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| MA0636.1 | Known | JASPAR | GTCACGTGAC | Direct PWM | Open · Scan | |
| M02782_2.00 | Known | CisBP | GGCACGTGAC | Direct PWM | Open · Scan | |
| M02783_2.00 | Known | CisBP | GTCACGTGAC | Direct PWM | Open · Scan | |
| M04106_2.00 | Known | CisBP | GTCACGTGAC | Direct PWM | Open · Scan | |
| M04107_2.00 | Known | CisBP | GTCACGTGAC | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
482 aa
49-122
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 49-1221 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_Q9C0J9:49:122_1am9_C_1 | 1am9 | 49-122 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 47-99 | PF00010 | Helix-loop-helix DNA-binding domain | overlaps 49-122 |
| 131-170 | PF07527 | Hairy Orange | No overlap with loaded model regions |