ModCRE DB

Transcription factor

Q9H165 - BCL11A

BCL11 transcription factor A (B-cell CLL/lymphoma 11A) (B-cell lymphoma/leukemia 11A) (BCL-11A) (COUP-TF-interacting protein 1) (Ecotropic viral integration site 9 protein homolog) (EVI-9) (Zinc finger protein 856)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 835 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
M08881_2.00 Known CisBP TTTTCACTTCCTCTTTT Direct PWM Open · Scan
MA2324.1 Known JASPAR CTGACCA Direct PWM Open · Scan
M00983_2.00 Known CisBP CTCCGGCCAC Direct PWM Open · Scan
M00984_2.00 Known CisBP ACTGACCA Direct PWM Open · Scan
M00985_2.00 Known CisBP ACTGACCGCT Direct PWM Open · Scan
M07926_2.00 Known CisBP GTTTCACTTCCTCTT Direct PWM Open · Scan
BC11A_HUMAN.H11MO.0.A Known HOCOMOCO AAAAGAGGAAGTGAAAA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 835 aa
10-51

Region 10-51 0 PWM

Residues
42 aa
Domains
PF25491 · BCL-11A-like CCHC zinc finger
3D models
1 active PDB
Templates
1RAM
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 10-511 model
Actions
Predicted = Low DIMER_Q9H165:10:51_1ram_B_1 1ram 10-51 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
45-72PF25491BCL-11A-like CCHC zinc fingeroverlaps 10-51
378-399PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
405-427PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
743-764PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
770-793PF23611C2H2 zinc fingerNo overlap with loaded model regions
800-823PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions