Transcription factor

Q9H2C1 - LHX5

LIM/homeobox protein Lhx5 (LIM homeobox protein 5)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 402 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5

Motif	Prediction	Source	DNA binding	Support	Actions
MA1519.1	Known	JASPAR	GTAATTAA	Direct PWM	Open · Scan
MA1519.2	Known	JASPAR	GTAATTA	Direct PWM	Open · Scan
M04936_2.00	Known	CisBP	TTAATTAC	Direct PWM	Open · Scan
M04937_2.00	Known	CisBP	TTAACGAG	Direct PWM	Open · Scan
M04938_2.00	Known	CisBP	TTAATTAC	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 402 aa

179-237

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 179-2371 model

				Actions
Predicted = Low	DIMER_Q9H2C1:179:237_1fjl_A_1	1fjl	179-237	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
5-60	PF00412	LIM domain	No overlap with loaded model regions
64-121	PF00412	LIM domain	No overlap with loaded model regions
181-237	PF00046	Homeodomain	overlaps 179-237