ModCRE DB

Transcription factor

Q9H4T2 - ZSCAN16

Zinc finger and SCAN domain-containing protein 16 (Zinc finger protein 392) (Zinc finger protein 435)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 348 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
M02924_2.00 Known CisBP AGTGTTAACAGAACACCT Direct PWM Open · Scan
MA2100.1 Known JASPAR AAGTGTTAACAGAGCCTC Direct PWM Open · Scan
M04623_2.00 Known CisBP AGAGGCTCTGTTAACACTT Direct PWM Open · Scan
M04624_2.00 Known CisBP AGAGGCTCTGTTAACACTT Direct PWM Open · Scan
M04625_2.00 Known CisBP AGAGGCTCTGTTAACACTT Direct PWM Open · Scan
M04626_2.00 Known CisBP TGAGGCTCTGTTAACACTT Direct PWM Open · Scan
M08377_2.00 Known CisBP ATATATATATATGTATATATATAT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 348 aa
236-342

Region 236-342 0 PWM

Residues
107 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
6E93
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 236-3421 model
Actions
Predicted = Low TFS_Q9H4T2:236:342_6e93_A_1 6e93 236-342 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
38-125PF02023SCAN domainNo overlap with loaded model regions
236-258PF00096Zinc finger, C2H2 typeoverlaps 236-342
264-286PF00096Zinc finger, C2H2 typeoverlaps 236-342
292-314PF00096Zinc finger, C2H2 typeoverlaps 236-342
320-342PF00096Zinc finger, C2H2 typeoverlaps 236-342