Region 107-143 4 PWM
- Residues
- 37 aa
- Domains
- PF02376 · CUT domain
- 3D models
- 4 active PDBs · 4 summary rows
- Templates
- 2D5V, 2O49, 2O4A, 6LFF
- Sources
- Predicted = Low
Transcription factor
Q9H726
cDNA: FLJ21474 fis, clone COL04941
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 178 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE4
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_Q9H726_Q9H726_HUMAN:107:139_2o49_A_1 | ModCRE | Homology model | GTTAATATTAA | Region 107-139 · 1 3D model | Open · Scan | |
| TFS_tr_Q9H726_Q9H726_HUMAN:107:139_2o4a_A_1 | ModCRE | Homology model | TATAATATACT | Region 107-139 · 1 3D model | Open · Scan | |
| TFS_tr_Q9H726_Q9H726_HUMAN:108:139_6lff_A_1 | ModCRE | Homology model | AGTAAATAA | Region 108-139 · 1 3D model | Open · Scan | |
| TFS_tr_Q9H726_Q9H726_HUMAN:111:143_2d5v_A_1 | ModCRE | Homology model | AACCGGTCTGC | Region 111-143 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
178 aa
107-143
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
4 active PDB models
4 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 107-1434 models · 4 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_Q9H726_Q9H726_HUMAN:107:139_2o49_A_1 | 2o49 | 107-139 | View model · PDB |
| Predicted = Low | TFS_tr_Q9H726_Q9H726_HUMAN:107:139_2o4a_A_1 | 2o4a | 107-139 | View model · PDB |
| Predicted = Low | TFS_tr_Q9H726_Q9H726_HUMAN:108:139_6lff_A_1 | 6lff | 108-139 | View model · PDB |
| Predicted = Low | TFS_tr_Q9H726_Q9H726_HUMAN:111:143_2d5v_A_1 | 2d5v | 111-143 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 2o4a | 107:143 | 107 | 139 | P:A · DNA:B,C | 84.8% / 90.9% | 39 | View · PDB TFS_tr_Q9H726_Q9H726_HUMAN:107:139_2o4a_A_1 |
| 2 | 2o49 | 107:143 | 107 | 139 | P:A · DNA:B,C | 84.8% / 90.9% | 39 | View · PDB TFS_tr_Q9H726_Q9H726_HUMAN:107:139_2o49_A_1 |
| 3 | 6lff | 107:143 | 108 | 139 | P:A · DNA:C,D | 84.4% / 90.6% | 39 | View · PDB TFS_tr_Q9H726_Q9H726_HUMAN:108:139_6lff_A_1 |
| 4 | 2d5v | 107:143 | 111 | 143 | P:A · DNA:C,D | 39.4% / 66.7% | 24 | View · PDB TFS_tr_Q9H726_Q9H726_HUMAN:111:143_2d5v_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 108-142 | PF02376 | CUT domain | overlaps 107-143 |